Structure of PDB 8bid Chain D Binding Site BS02

Receptor Information
>8bid Chain D (length=319) Species: 243265 (Photorhabdus laumondii subsp. laumondii TTO1) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
SMLTELIASNRRSAAIHAFVDTGLSTHFKDGIYVDISELSRKSGVNYARF
SRLCDFLVEMGVLVSNDNKFRLSDECHVFANPESFESFMIKLEICSHYSN
AWLMYGKSLFEDDGKSAFEMAHGRPFFEYLDGNKFLKSNFDALMTRVSNL
IVEKLLGIYDFNQHNRILDVGGGEGELLVRISEKVKGKHYAVLDRYSELP
VSDNIDFINGNFLNSIPSGYDLYILKNVLNNWSDSDSILILENFRKAMDK
NSSLLLINMVKEPEFSRSFDILMDVLFLGKERSFTEFEYLANQAGLVVQE
TKVIDQSYSPYSFIKLQIK
Ligand information
Ligand IDQPF
InChIInChI=1S/C15H10O5/c1-20-11-6-7(16)5-9-13(11)15(19)12-8(14(9)18)3-2-4-10(12)17/h2-6,16-17H,1H3
InChIKeyMKPXKUVNBNOJOI-UHFFFAOYSA-N
SMILES
SoftwareSMILES
OpenEye OEToolkits 3.1.0.0COc1cc(cc2c1C(=O)c3c(cccc3O)C2=O)O
CACTVS 3.385COc1cc(O)cc2C(=O)c3cccc(O)c3C(=O)c12
FormulaC15 H10 O5
Name1-methoxy-3,8-bis(oxidanyl)anthracene-9,10-dione
ChEMBL
DrugBank
ZINC
PDB chain8bid Chain D Residue 402 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB8bid A set of closely related methyltransferases for site-specific tailoring of anthraquinone pigments.
Resolution1.75 Å
Binding residue
(original residue number in PDB)		M88 F139 L142 M143 N229 N230 F268 M272
Binding residue
(residue number reindexed from 1)		M89 F140 L143 M144 N230 N231 F269 M273
Annotation score1
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0008168 methyltransferase activity
GO:0008171 O-methyltransferase activity

View graph for
Molecular Function
External links
PDB RCSB:8bid, PDBe:8bid, PDBj:8bid
PDBsum8bid
PubMed36963398
UniProtQ7MY08

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