Structure of PDB 7ytq Chain D Binding Site BS02
Receptor Information
>7ytq Chain D (length=129) Species:
9606
(Homo sapiens) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
GWKYFKGNFYYFSLIPKTWYSAEQFCVSRNSHLTSVTSESEQEFLYKTAG
GLIYWIGLTKAGMEGDWSWVDDTPFNKVQSARFWIPGEPNNAGNNEHCGN
IKAPSLQAWNDAPCDKTFLFICKRPYVPS
Ligand information
Ligand ID
TRP
InChI
InChI=1S/C11H12N2O2/c12-9(11(14)15)5-7-6-13-10-4-2-1-3-8(7)10/h1-4,6,9,13H,5,12H2,(H,14,15)/t9-/m0/s1
InChIKey
QIVBCDIJIAJPQS-VIFPVBQESA-N
SMILES
Software
SMILES
ACDLabs 10.04
O=C(O)C(N)Cc2c1ccccc1nc2
OpenEye OEToolkits 1.5.0
c1ccc2c(c1)c(c[nH]2)C[C@@H](C(=O)O)N
OpenEye OEToolkits 1.5.0
c1ccc2c(c1)c(c[nH]2)CC(C(=O)O)N
CACTVS 3.341
N[CH](Cc1c[nH]c2ccccc12)C(O)=O
CACTVS 3.341
N[C@@H](Cc1c[nH]c2ccccc12)C(O)=O
Formula
C11 H12 N2 O2
Name
TRYPTOPHAN
ChEMBL
CHEMBL54976
DrugBank
DB00150
ZINC
ZINC000000083315
PDB chain
7ytq Chain D Residue 401 [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
7ytq
Human langerin carbohydrate recognition domain in complex with an alpha-mannoside ligand
Resolution
1.6 Å
Binding residue
(original residue number in PDB)
K257 G259 M260 G262
Binding residue
(residue number reindexed from 1)
K60 G62 M63 G65
Annotation score
4
Enzymatic activity
Enzyme Commision number
?
External links
PDB
RCSB:7ytq
,
PDBe:7ytq
,
PDBj:7ytq
PDBsum
7ytq
PubMed
UniProt
Q9UJ71
|CLC4K_HUMAN C-type lectin domain family 4 member K (Gene Name=CD207)
[
Back to BioLiP
]