Structure of PDB 7qy5 Chain D Binding Site BS02

Receptor Information
>7qy5 Chain D (length=320) Species: 4896 (Schizosaccharomyces pombe) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
QLSKWNQDSRNDAMENTLLVSHVLPNISVAQIHNALDGISFVQHFSLSTI
NLIKNDERSLWVHFKAGTNMDGAKEAVDGIQLDSNFTIESENPKIPTHTH
PIPIFEIASSEQTCKNLLEKLIRFIDRASTKYSLPNDAAQRIEDRLKTHA
SMDDKPTNFHDIRLSDLYAEYLRQVATFDFWTSKEYESLIALLQDSPAGY
SRKKFNPSKEVQEENIWLSDLENNFACLLEPENVDIKAKGALPVEDFINN
ELDSVIMKEDEQKYRCHVGTCAKLFLGPEFVRKHINKKHKDWLDHIKKVA
ICLYGYVLDPCRAMDPKVVS
Ligand information
Ligand IDZN
InChIInChI=1S/Zn/q+2
InChIKeyPTFCDOFLOPIGGS-UHFFFAOYSA-N
SMILES
SoftwareSMILES
CACTVS 3.341[Zn++]
ACDLabs 10.04
OpenEye OEToolkits 1.5.0		[Zn+2]
FormulaZn
NameZINC ION
ChEMBLCHEMBL1236970
DrugBankDB14532
ZINC
PDB chain7qy5 Chain D Residue 601 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB7qy5 Structural analysis of Red1 as a conserved scaffold of the RNA-targeting MTREC/PAXT complex.
Resolution2.77 Å
Binding residue
(original residue number in PDB)		C476 C481 H494 H499
Binding residue
(residue number reindexed from 1)		C266 C271 H284 H289
Annotation score4
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Biological Process
GO:0006397 mRNA processing

View graph for
Biological Process
External links
PDB RCSB:7qy5, PDBe:7qy5, PDBj:7qy5
PDBsum7qy5
PubMed36002457
UniProtO94326|PIR2_SCHPO NURS complex subunit pir2 (Gene Name=pir2)

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