Structure of PDB 7apd Chain D Binding Site BS02
Receptor Information
>7apd Chain D (length=287) Species:
10571
(Bovine papillomavirus) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
TEKFDFGTMVQWAYDHKYAEESKIAYEYALAAGSDSNARAFLATNSQAKH
VKDCATMVRHYLRAETQALSMPAYIKARCKLATGEGSWKSILTFFNYQNI
ELITFINALKLWLKGIPKKNCLAFIGPPNTGKSMLCNSLIHFLGGSVLSF
ANHKSHFWLASLADTRAALVDDATHACWRYFDTYLRNALDGYPVSIDRKH
KAAVQIKAPPLLVTSNIDVQAEDRYLYLHSRVQTFRFEQPCTDESGEQPF
NITDADWKSFFVRLWGRLDLIDEEEDSEEDGDSMRTF
Ligand information
>7apd Chain T (length=36) [
Search DNA sequence
] [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
cccccccgtgcgcgctgaggtgcggtgtgaaataca
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
7apd
Unwinding of a DNA replication fork by a hexameric viral helicase.
Resolution
3.9 Å
Binding residue
(original residue number in PDB)
T308 R346 A347 L349 A350 T351 N352
Binding residue
(residue number reindexed from 1)
T1 R39 A40 L42 A43 T44 N45
Enzymatic activity
Enzyme Commision number
3.6.4.12
: DNA helicase.
Gene Ontology
Molecular Function
GO:0003677
DNA binding
GO:0003678
DNA helicase activity
GO:0005524
ATP binding
Biological Process
GO:0006260
DNA replication
View graph for
Molecular Function
View graph for
Biological Process
External links
PDB
RCSB:7apd
,
PDBe:7apd
,
PDBj:7apd
PDBsum
7apd
PubMed
34545080
UniProt
P03116
|VE1_BPV1 Replication protein E1 (Gene Name=E1)
[
Back to BioLiP
]