Structure of PDB 6wdz Chain D Binding Site BS02

Receptor Information
>6wdz Chain D (length=102) Species: 85708 (Porcine circovirus 2) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
PQPHKRWVFTLNNPSEDERKKIRDLPISLFDYFIVGEEGNEEGRTPHLQG
FANFVKKQTFNKVKWYLGARCHIEKAKGTDQQNKEFCSKEGNLLMECGAP
RS
Ligand information
Ligand IDMN
InChIInChI=1S/Mn/q+2
InChIKeyWAEMQWOKJMHJLA-UHFFFAOYSA-N
SMILES
SoftwareSMILES
ACDLabs 10.04
OpenEye OEToolkits 1.5.0		[Mn+2]
CACTVS 3.341[Mn++]
FormulaMn
NameMANGANESE (II) ION
ChEMBL
DrugBankDB06757
ZINC
PDB chain6wdz Chain D Residue 201 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
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PDB6wdz Molecular underpinnings of ssDNA specificity by Rep HUH-endonucleases and implications for HUH-tag multiplexing and engineering.
Resolution2.03 Å
Binding residue
(original residue number in PDB)		E48 H57 Q59
Binding residue
(residue number reindexed from 1)		E38 H47 Q49
Annotation score1
Enzymatic activity
Enzyme Commision number 2.7.7.-
3.1.21.-
3.6.1.-
Gene Ontology
Biological Process
GO:0006260 DNA replication

View graph for
Biological Process
External links
PDB RCSB:6wdz, PDBe:6wdz, PDBj:6wdz
PDBsum6wdz
PubMed33410911
UniProtQ8BB16|REP_PCV2 Replication-associated protein (Gene Name=Rep)

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