Structure of PDB 6ugm Chain D Binding Site BS02

Receptor Information
>6ugm Chain D (length=93) Species: 8355 (Xenopus laevis) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
TRKESYAIYVYKVLKQVHPDTGISSKAMSIMNSFVNDVFERIAGEASRLA
HYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSA
Ligand information
>6ugm Chain J (length=146) [Search DNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
atcggatgtatatatctgacacgtgcctggagactagggagtaatcccct
tggcggttaaaacgcgggggacagcgcgtacgtgcgtttaagcggtgcta
gagctgtctacgaccaattgagcggcctcggcaccgggattctcga
Receptor-Ligand Complex Structure
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PDB6ugm Structural Basis of H2B Ubiquitination-Dependent H3K4 Methylation by COMPASS.
Resolution3.7 Å
Binding residue
(original residue number in PDB)		Y39 I51 S52 S53 R83 S84 T85
Binding residue
(residue number reindexed from 1)		Y11 I23 S24 S25 R55 S56 T57
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0003677 DNA binding
GO:0005515 protein binding
GO:0030527 structural constituent of chromatin
GO:0046982 protein heterodimerization activity
Cellular Component
GO:0000786 nucleosome
GO:0005634 nucleus
GO:0005694 chromosome

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Molecular Function
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Cellular Component
External links
PDB RCSB:6ugm, PDBe:6ugm, PDBj:6ugm
PDBsum6ugm
PubMed31733991
UniProtP02281|H2B11_XENLA Histone H2B 1.1

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