Structure of PDB 6r2j Chain D Binding Site BS02

Receptor Information
>6r2j Chain D (length=329) Species: 379731 (Stutzerimonas stutzeri A1501) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
ADWPVNDEGGLALHGVNISGAGFAPHITPGKNGTHYFYPEKKHFKYYADQ
GIRLIRFPFIWERVQHSLDSGLNFDQIRLLKKTLDLAAQNGQKVILDMHN
YGRYHGELIGSSKVPYEAYASVWRKLAERFKGHPGLLGYDIMNEPHSTVG
LWPGAAQAAVDAIREVDDQTLIFIEGERWSSAYHWPLVNANFLINDPADR
LIYEAHLYFDDDFSGKYMAQTSRNIDPMIGVERARPFIEWLQKHGQKGFL
GEYGIPDDLPEAAQAMDNLLAYLNDNCVPSAYWAGGPGWGTYKLAIEPRN
GKDRPQMELMRKHLANDCTAIGPTPAQIA
Ligand information
Ligand IDBGC
InChIInChI=1S/C6H12O6/c7-1-2-3(8)4(9)5(10)6(11)12-2/h2-11H,1H2/t2-,3-,4+,5-,6-/m1/s1
InChIKeyWQZGKKKJIJFFOK-VFUOTHLCSA-N
SMILES
SoftwareSMILES
OpenEye OEToolkits 1.7.6C(C1C(C(C(C(O1)O)O)O)O)O
CACTVS 3.370OC[C@H]1O[C@@H](O)[C@H](O)[C@@H](O)[C@@H]1O
CACTVS 3.370OC[CH]1O[CH](O)[CH](O)[CH](O)[CH]1O
OpenEye OEToolkits 1.7.6C([C@@H]1[C@H]([C@@H]([C@H]([C@@H](O1)O)O)O)O)O
ACDLabs 12.01OC1C(O)C(OC(O)C1O)CO
FormulaC6 H12 O6
Namebeta-D-glucopyranose;
beta-D-glucose;
D-glucose;
glucose
ChEMBLCHEMBL1614854
DrugBankDB02379
ZINCZINC000003833800
PDB chain6r2j Chain F Residue 2 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB6r2j Crystal structure determination of Pseudomonas stutzeri A1501 endoglucanase Cel5A: the search for a molecular basis for glycosynthesis in GH5_5 enzymes.
Resolution1.44 Å
Binding residue
(original residue number in PDB)		E144 R178 W179 S180 S181 H206 Y208 F213 S214
Binding residue
(residue number reindexed from 1)		E144 R178 W179 S180 S181 H206 Y208 F213 S214
Annotation score4
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0016798 hydrolase activity, acting on glycosyl bonds
Biological Process
GO:0000272 polysaccharide catabolic process
GO:0005975 carbohydrate metabolic process
GO:0009251 glucan catabolic process

View graph for
Molecular Function
View graph for
Biological Process
External links
PDB RCSB:6r2j, PDBe:6r2j, PDBj:6r2j
PDBsum6r2j
PubMed
UniProtA4VME5

[Back to BioLiP]