Structure of PDB 6dka Chain D Binding Site BS02

Receptor Information
>6dka Chain D (length=229) Species: 307796 (Saccharomyces cerevisiae YJM789) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
SPEFMSQYGFVRVPREVEKAIPVVNAPRPRAVVPPPNSETARLVREYAAK
ELTAPVLNHSLRVFQYSVAIIRDQFPAWDLDQEVLYVTCLLHDIATTDKN
MRATKMSFEYYGGILSRELVFNATGGNQDYADAVTEAIIRHQDLTGTGYI
TTLGLILQIAVTLDNVGSNTDLIHIDTVSAINEQFPRLHWLSCFATVVDT
ENSRKPWGHTSSLGDDFSKKVICNTFGYT
Ligand information
Ligand IDCNN
InChIInChI=1S/CH2N2/c2-1-3/h2H2
InChIKeyXZMCDFZZKTWFGF-UHFFFAOYSA-N
SMILES
SoftwareSMILES
CACTVS 3.341NC#N
OpenEye OEToolkits 1.5.0C(#N)N
ACDLabs 10.04N#CN
FormulaC H2 N2
NameCYANAMIDE
ChEMBLCHEMBL56279
DrugBankDB02679
ZINC
PDB chain6dka Chain D Residue 303 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB6dka Structure of Ddi2, a highly inducible detoxifying metalloenzyme fromSaccharomyces cerevisiae.
Resolution2.901 Å
Binding residue
(original residue number in PDB)		D89 H137 V157 F190
Binding residue
(residue number reindexed from 1)		D93 H141 V161 F194
Annotation score1
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0046872 metal ion binding

View graph for
Molecular Function
External links
PDB RCSB:6dka, PDBe:6dka, PDBj:6dka
PDBsum6dka
PubMed31152065
UniProtA7A1Y4

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