Structure of PDB 6b1t Chain D Binding Site BS02

Receptor Information
>6b1t Chain D (length=906) Species: 28285 (Human adenovirus 5) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
MPQWSYMHISGQDASEYLSPGLVQFARATETYFSLNNKFRNPTVAPTHDV
TTDRSQRLTLRFIPVDREDTAYSYKARFTLAVGDNRVLDMASTYFDIRGV
LDRGPTFKPYSGTAYNALAPKGAPNPCEWDEAQKTHVFGQAPYSGINITK
EGIQIGVEGQTPKYADKTFQPEPQIGESQWYETEINHAAGRVLKKTTPMK
PCYGSYAKPTNENGGQGILVKQLESQVEMQFFSTTEATNLTPKVVLYSED
VDIETPDTHISYMPTIKEGNSRELMGQQSMPNRPNYIAFRDNFIGLMYYN
STGNMGVLAGQASQLNAVVDLQDRNTELSYQLLLDSIGDRTRYFSMWNQA
VDSYDPDVRIIENHGTEDELPNYCFPLGGVINTETLTKVKPKTNGWEKDA
TEFSDKNEIRVGNNFAMEINLNANLWRNFLYSNIALYLPDKLKYSPSNVK
ISDNPNTYDYMNKRVVAPGLVDCYINLGARWSLDYMDNVNPFNHHRNAGL
RYRSMLLGNGRYVPFHIQVPQKFFAIKNLLLLPGSYTYEWNFRKDVNMVL
QSSLGNDLRVDGASIKFDSICLYATFFPMAHNTASTLEAMLRNDTNDQSF
NDYLSAANMLYPIPANATNVPISIPSRNWAAFRGWAFTRLKTKETPSLGS
GYDPYYTYSGSIPYLDGTFYLNHTFKKVAITFDSSVSWPGNDRLLTPNEF
EIKRSVDGEGYNVAQCNMTKDWFLVQMLANYNIGYQGFYIPESYKDRMYS
FFRNFQPMSRQVVDDTKYKDYQQVGILHQHNNSGFVGYLAPTMREGQAYP
ANFPYPLIGKTAVDSITQKKFLCDRTLWRIPFSSNFMSMGALTDLGQNLL
YANSAHALDMTFEVDPMDEPTLLYVLFEVFDVVRVHRPHRGVIETVYLRT
PFSAGN
Ligand information
Receptor-Ligand Complex Structure
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PDB6b1t Atomic Structures of Minor Proteins VI and VII in Human Adenovirus.
Resolution3.2 Å
Binding residue
(original residue number in PDB)
L372 S376 N644 Y646 S648 R676 R872 A884 E921
Binding residue
(residue number reindexed from 1)
L332 S336 N601 Y603 S605 R633 R829 A841 E878
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0005198 structural molecule activity
Biological Process
GO:0046718 symbiont entry into host cell
GO:0075521 microtubule-dependent intracellular transport of viral material towards nucleus
Cellular Component
GO:0019028 viral capsid
GO:0039623 T=25 icosahedral viral capsid
GO:0042025 host cell nucleus
GO:0043657 host cell

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Molecular Function

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Biological Process

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Cellular Component
External links
PDB RCSB:6b1t, PDBe:6b1t, PDBj:6b1t
PDBsum6b1t
PubMed28978703
UniProtP04133|CAPSH_ADE05 Hexon protein (Gene Name=L3)

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