Structure of PDB 5zm3 Chain D Binding Site BS02
Receptor Information
>5zm3 Chain D (length=285) Species:
1549217
(Aspergillus stellatus) [
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HMPPIRRVNASQGSDAAYQILQEDGCVIVEQVICPNIIAKISDDVNRVMD
KATIGAKKGEQTHIINMHNRTIHMGDLVLTSKTYRDELLNLPFAHEVLEK
VFKKDSGDYWLNMGNILNMLPGAEAQRPHRDDYLYPVSQHMDPATSPDLM
INITFPLNEFRHDNGGTLLLPKSHTGPNADFYANAEDLPAAEMQVGDALI
FTGKCVHGGGANRSDKPRIGLALAAQPGYLTPRESNVNVPRDIVETMTPL
AQRMIGWGTVRTKDTYGLNMLQDKDFHEALGLKSK
Ligand information
Ligand ID
AKG
InChI
InChI=1S/C5H6O5/c6-3(5(9)10)1-2-4(7)8/h1-2H2,(H,7,8)(H,9,10)
InChIKey
KPGXRSRHYNQIFN-UHFFFAOYSA-N
SMILES
Software
SMILES
ACDLabs 10.04
O=C(O)C(=O)CCC(=O)O
OpenEye OEToolkits 1.7.6
C(CC(=O)O)C(=O)C(=O)O
CACTVS 3.385
OC(=O)CCC(=O)C(O)=O
Formula
C5 H6 O5
Name
2-OXOGLUTARIC ACID
ChEMBL
CHEMBL1686
DrugBank
DB08845
ZINC
ZINC000001532519
PDB chain
5zm3 Chain D Residue 302 [
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Receptor-Ligand Complex Structure
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PDB
5zm3
Structural and Computational Bases for Dramatic Skeletal Rearrangement in Anditomin Biosynthesis.
Resolution
2.25 Å
Binding residue
(original residue number in PDB)
Q132 H213 G215 R224
Binding residue
(residue number reindexed from 1)
Q126 H207 G209 R218
Annotation score
4
Enzymatic activity
Enzyme Commision number
1.14.11.-
Gene Ontology
Molecular Function
GO:0046872
metal ion binding
GO:0051213
dioxygenase activity
Biological Process
GO:0016114
terpenoid biosynthetic process
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Molecular Function
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Biological Process
External links
PDB
RCSB:5zm3
,
PDBe:5zm3
,
PDBj:5zm3
PDBsum
5zm3
PubMed
29972643
UniProt
A0A097ZPD5
|ANDA_EMEVA Dioxygenase andA (Gene Name=andA)
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