Structure of PDB 5zbu Chain D Binding Site BS02

Receptor Information
>5zbu Chain D (length=72) Species: 9606 (Homo sapiens) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
MNRLRKDQLKKLPVHKFKKGDEYDVCAICLDEYEDGDKLRILPCSHAYHC
KCVDPWLTKTKKTCPVCKQKVV
Ligand information
Ligand IDZN
InChIInChI=1S/Zn/q+2
InChIKeyPTFCDOFLOPIGGS-UHFFFAOYSA-N
SMILES
SoftwareSMILES
CACTVS 3.341[Zn++]
ACDLabs 10.04
OpenEye OEToolkits 1.5.0		[Zn+2]
FormulaZn
NameZINC ION
ChEMBLCHEMBL1236970
DrugBankDB14532
ZINC
PDB chain5zbu Chain D Residue 1002 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB5zbu Crystal Structure of PA-TM-RING E3 ligase RNF13 RING domain in complex with E2~Ub
Resolution3.2 Å
Binding residue
(original residue number in PDB)		C258 H260 C278
Binding residue
(residue number reindexed from 1)		C44 H46 C64
Annotation score4
Enzymatic activity
Enzyme Commision number 2.3.2.27: RING-type E3 ubiquitin transferase.
External links
PDB RCSB:5zbu, PDBe:5zbu, PDBj:5zbu
PDBsum5zbu
PubMed
UniProtO43567|RNF13_HUMAN E3 ubiquitin-protein ligase RNF13 (Gene Name=RNF13)

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