Structure of PDB 5v3g Chain D Binding Site BS02

Receptor Information
>5v3g Chain D (length=170) Species: 9606 (Homo sapiens) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
PGSEKPYVCRECGRGFSNKSHLLRHQRTHTGEKPYVCRECGRGFRDKSHL
LSHQRTHTGEKPYVCRECGRGFRDKSNLLSHQRTHTGEKPYVCRECGRGF
SWQSVLLRHQRTHTGEKPYVCRECGRGFRDKSNLLSHQRTHTGEKPYVCR
ECGRGFRNKSHLLRHQRTHT
Ligand information
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB5v3g Structural basis of human PR/SET domain 9 (PRDM9) allele C-specific recognition of its cognate DNA sequence.
Resolution2.416 Å
Binding residue
(original residue number in PDB)
K717 R726 F728 S729 H733 R736 H737 R757 H761 R782 R785 N789 H793 T796 W814 V817 R820 H821 R838 F840 R841 D842 N845 H849 H873 R876 H877
Binding residue
(residue number reindexed from 1)
K5 R14 F16 S17 H21 R24 H25 R45 H49 R70 R73 N77 H81 T84 W102 V105 R108 H109 R126 F128 R129 D130 N133 H137 H161 R164 H165
Enzymatic activity
Enzyme Commision number 2.1.1.43: Transferred entry: 2.1.1.354.
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