Structure of PDB 5ue9 Chain D Binding Site BS02
Receptor Information
>5ue9 Chain D (length=262) Species:
1360
(Lactococcus lactis subsp. lactis) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
MPKLQEMMTIVSQREVASNIFEMVLKGELVEEMDLPGQFLHLAVPNASML
LRRPISISSWDKVAKTCTILYRIGDETSGTYEISKLQSGAKIDVMGPLGN
GFPVDEVVSTDKILIVGGGIGVPPLYELAKQLEEKNCQMTILLGFASEKV
KILEKEFAELKNVSLKIATDDGSYGTKGHVGMLMEEIDFEVDALYTCGAP
AMLKAVAKKYEQLERLYISMESRMACGIGACYACVEHDKEDENHALKVCE
DGPVFLGKQLLL
Ligand information
Ligand ID
FES
InChI
InChI=1S/2Fe.2S
InChIKey
NIXDOXVAJZFRNF-UHFFFAOYSA-N
SMILES
Software
SMILES
ACDLabs 10.04
[Fe]1S[Fe]S1
CACTVS 3.341
OpenEye OEToolkits 1.5.0
S1[Fe]S[Fe]1
Formula
Fe2 S2
Name
FE2/S2 (INORGANIC) CLUSTER
ChEMBL
DrugBank
ZINC
PDB chain
5ue9 Chain D Residue 302 [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
5ue9
Isoleucine 74 Plays a Key Role in Controlling Electron Transfer Between Lactococcus lactis Dihydroorotate Dehydrogenase 1B Subunits
Resolution
2.72 Å
Binding residue
(original residue number in PDB)
M224 C226 G227 G229 A230 C231 Y232 C234 C249
Binding residue
(residue number reindexed from 1)
M224 C226 G227 G229 A230 C231 Y232 C234 C249
Annotation score
4
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Molecular Function
GO:0009055
electron transfer activity
GO:0016491
oxidoreductase activity
GO:0046872
metal ion binding
GO:0050660
flavin adenine dinucleotide binding
GO:0051537
2 iron, 2 sulfur cluster binding
Biological Process
GO:0006221
pyrimidine nucleotide biosynthetic process
GO:0044205
'de novo' UMP biosynthetic process
View graph for
Molecular Function
View graph for
Biological Process
External links
PDB
RCSB:5ue9
,
PDBe:5ue9
,
PDBj:5ue9
PDBsum
5ue9
PubMed
UniProt
Q9CFW7
|PYRK_LACLA Dihydroorotate dehydrogenase B (NAD(+)), electron transfer subunit (Gene Name=pyrK)
[
Back to BioLiP
]