BioLiP

Receptor Information

>5oy7 Chain D (length=95) Species: 8355 (Xenopus laevis) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]

KTRKESYAIYVYKVLKQVHPDTGISSKAMSIMNSFVNDVFERIAGEASRL
AHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSAK

>5oy7 Chain h (length=619) [Search DNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]

gcacaggatgtatatatctgacacgtgcctggagactagggagtaatccc
cttggcggttaaaacgcgggggacagcgcgtacgtgcgtttaagcggtgc
tagagctgtctacgaccaattgagcggcctcggcacgggattctccaggg
agtactgcacaggatgtatatatctgacacgtgcctggagactagggagt
aatccccttggcggttaaaacgcgggggacagcgcgtacgtgcgtttaag
cggtgctagagctgtctacgaccaattgagcggcctcggcccgggattct
ccagggagtactgcacaggatgtatatatctgacacgtgcctggagacta
gggagtaatccccttggcggttaaaacgcgggggacagcgcgtacgtgcg
tttaagcggtgctagagctgtctacgaccaattgagcggcctcggcacgg
gattctccagggagtactgcacaggatgtatatatctgacacgtgcctgg
agactagggagtaatccccttggcggttaaaacgcgggggacagcgcgta
cgtgcgtttaagcggtgctagagctgtctacgaccaattgagcggcctcg
gcaccgggattctccaggg

Receptor-Ligand Complex Structure

Global view

Local view

Structure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]

PDB	5oy7 Capturing Structural Heterogeneity in Chromatin Fibers.
Resolution	5.774 Å
Binding residue (original residue number in PDB)	K28 R30 K31 Y37
Binding residue (residue number reindexed from 1)	K1 R3 K4 Y10

Enzyme Commision number

	Molecular Function
GO:0003677	DNA binding
GO:0005515	protein binding
GO:0030527	structural constituent of chromatin
GO:0046982	protein heterodimerization activity

	Cellular Component
GO:0000786	nucleosome
GO:0005634	nucleus
GO:0005694	chromosome

PDB	RCSB:5oy7, PDBe:5oy7, PDBj:5oy7
PDBsum	5oy7
PubMed	28893533
UniProt	P02281\|H2B11_XENLA Histone H2B 1.1

[Back to BioLiP]

Structure of PDB 5oy7 Chain D Binding Site BS02