Structure of PDB 5oxv Chain D Binding Site BS02

Receptor Information
>5oxv Chain D (length=95) Species: 8355 (Xenopus laevis) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
KTRKESYAIYVYKVLKQVHPDTGISSKAMSIMNSFVNDVFERIAGEASRL
AHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSAK
Ligand information
>5oxv Chain I (length=311) [Search DNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
cccctggagaatcccggtgccgaggccgctcaattggtcgtagacagctc
tagcaccgcttaaacgcacgtacgcgctgtcccccgcgttttaaccgcca
aggggattactccctagtctccaggcacgtgtcagatatatacatcctgt
gcagtactcctggagaatcccggtgccgaggccgctcaattggtcgtaga
cagctctagcaccgcttaaacgcacgtacgcgctgtcccccgcgttttaa
ccgccaaggggattactccctagtctccaggcacgtgtcagatatataca
tcctgtgcagt
Receptor-Ligand Complex Structure
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PDB5oxv Capturing Structural Heterogeneity in Chromatin Fibers.
Resolution6.721 Å
Binding residue
(original residue number in PDB)		T29 R30 Y39 G50 I51 S53 R83 S84 T85
Binding residue
(residue number reindexed from 1)		T2 R3 Y12 G23 I24 S26 R56 S57 T58
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0003677 DNA binding
GO:0005515 protein binding
GO:0030527 structural constituent of chromatin
GO:0046982 protein heterodimerization activity
Cellular Component
GO:0000786 nucleosome
GO:0005634 nucleus
GO:0005694 chromosome

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Molecular Function
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Cellular Component
External links
PDB RCSB:5oxv, PDBe:5oxv, PDBj:5oxv
PDBsum5oxv
PubMed28893533
UniProtP02281|H2B11_XENLA Histone H2B 1.1

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