Structure of PDB 5l1z Chain D Binding Site BS02
Receptor Information
>5l1z Chain D (length=49) Species:
11678
(Human immunodeficiency virus type 1 BH10) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
MEPVDPRLEPWKHPGSQPKTACTNCYCKKCCFHCQVCFITKALGISYGR
Ligand information
Ligand ID
ZN
InChI
InChI=1S/Zn/q+2
InChIKey
PTFCDOFLOPIGGS-UHFFFAOYSA-N
SMILES
Software
SMILES
CACTVS 3.341
[Zn++]
ACDLabs 10.04
OpenEye OEToolkits 1.5.0
[Zn+2]
Formula
Zn
Name
ZINC ION
ChEMBL
CHEMBL1236970
DrugBank
DB14532
ZINC
PDB chain
5l1z Chain D Residue 101 [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
5l1z
Insights into HIV-1 proviral transcription from integrative structure and dynamics of the Tat:AFF4:P-TEFb:TAR complex.
Resolution
5.9 Å
Binding residue
(original residue number in PDB)
C22 H33 C34
Binding residue
(residue number reindexed from 1)
C22 H33 C34
Annotation score
4
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Molecular Function
GO:0001070
RNA-binding transcription regulator activity
Biological Process
GO:0050434
positive regulation of viral transcription
Cellular Component
GO:0042025
host cell nucleus
View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB
RCSB:5l1z
,
PDBe:5l1z
,
PDBj:5l1z
PDBsum
5l1z
PubMed
27731797
UniProt
P69697
|TAT_HV1B1 Protein Tat (Gene Name=tat)
[
Back to BioLiP
]