Structure of PDB 5kk1 Chain D Binding Site BS02
Receptor Information
>5kk1 Chain D (length=91) Species:
84600
(Sulfolobus sp. NOB8H2) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
GKISTDKYIFLTPRAYIIVHLLKVGKAKASEISENTQIPYQTVIQNIRWL
LAEGYVVKEQKGEEIYYKLTDKGKQLATAELEKIRKLVEVV
Ligand information
>5kk1 Chain N (length=31) [
Search DNA sequence
] [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
aaatatgctctatgattaacatagagcaatt
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
5kk1
Structures of archaeal DNA segregation machinery reveal bacterial and eukaryotic linkages.
Resolution
3.38 Å
Binding residue
(original residue number in PDB)
G2 K3 I4 S5 Y41 Q42 I45 R49
Binding residue
(residue number reindexed from 1)
G1 K2 I3 S4 Y40 Q41 I44 R48
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Molecular Function
GO:0003700
DNA-binding transcription factor activity
GO:0005515
protein binding
GO:0042802
identical protein binding
Biological Process
GO:0006355
regulation of DNA-templated transcription
View graph for
Molecular Function
View graph for
Biological Process
External links
PDB
RCSB:5kk1
,
PDBe:5kk1
,
PDBj:5kk1
PDBsum
5kk1
PubMed
UniProt
O93706
[
Back to BioLiP
]