Structure of PDB 5k1y Chain D Binding Site BS02
Receptor Information
>5k1y Chain D (length=92) Species:
84600
(Sulfolobus sp. NOB8H2) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
GKISTDKYIFLTPRAYIIVHLLKVGKAKASEISENTQIPYQTVIQNIRWL
LAEGYVVKEQKGEEIYYKLTDKGKQLATAELEKIRKLVEVVQ
Ligand information
>5k1y Chain N (length=33) [
Search DNA sequence
] [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
tgtcacgaactatgtagttcgtgacaatgacaa
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
5k1y
Detailed structural analysis of AspA-DNA contacts
Resolution
2.97 Å
Binding residue
(original residue number in PDB)
G2 K3 S5 A30 Y41 I45 R49 Y68
Binding residue
(residue number reindexed from 1)
G1 K2 S4 A29 Y40 I44 R48 Y67
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Molecular Function
GO:0003700
DNA-binding transcription factor activity
GO:0005515
protein binding
GO:0042802
identical protein binding
Biological Process
GO:0006355
regulation of DNA-templated transcription
View graph for
Molecular Function
View graph for
Biological Process
External links
PDB
RCSB:5k1y
,
PDBe:5k1y
,
PDBj:5k1y
PDBsum
5k1y
PubMed
UniProt
O93706
[
Back to BioLiP
]