Structure of PDB 5bwh Chain D Binding Site BS02
Receptor Information
>5bwh Chain D (length=358) Species:
47914
(Brevibacterium fuscum) [
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IPKPVAPAPDILRCAYAELVVTDLAKSRNFYVDVLGLHVSYEDENQIYLR
SFEEFIHHNLVLTKGPVAALKAMAFRVRTPEDVDKAEAYYQELGCRTERR
KDGFVKGIGDALRVEDPLGFPYEFFFETTHVERLHMRYDLYSAGELVRLD
HFNQVTPDVPRGRKYLEDLGFRVTEDIQDDEGTTYAAWMHRKGTVCDTAL
TGGNGPRLHHVAFSTHEKHNIIQICDKMGALRISDRIERGPGRHGVSNAF
YLYILDPDNHRIEIYTQDYYTGDPDNPTITWNVHDNQRRDWWGNPVVPSW
YTEASKVLDLDGNVQEIIERTDDSELEVTIGADGFSFTRAGDEDGSYHGQ
ASKGFKLG
Ligand information
Ligand ID
DHY
InChI
InChI=1S/C8H8O4/c9-6-2-1-5(3-7(6)10)4-8(11)12/h1-3,9-10H,4H2,(H,11,12)
InChIKey
CFFZDZCDUFSOFZ-UHFFFAOYSA-N
SMILES
Software
SMILES
OpenEye OEToolkits 1.5.0
c1cc(c(cc1CC(=O)O)O)O
CACTVS 3.341
OC(=O)Cc1ccc(O)c(O)c1
ACDLabs 10.04
O=C(O)Cc1cc(O)c(O)cc1
Formula
C8 H8 O4
Name
2-(3,4-DIHYDROXYPHENYL)ACETIC ACID
ChEMBL
CHEMBL1284
DrugBank
DB01702
ZINC
ZINC000000388555
PDB chain
5bwh Chain D Residue 403 [
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Receptor-Ligand Complex Structure
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PDB
5bwh
A Long-Lived Fe(III)-(Hydroperoxo) Intermediate in the Active H200C Variant of Homoprotocatechuate 2,3-Dioxygenase: Characterization by Mossbauer, Electron Paramagnetic Resonance, and Density Functional Theory Methods.
Resolution
1.46 Å
Binding residue
(original residue number in PDB)
H155 W192 H214 R243 H248 V250 Y257 E267 R293
Binding residue
(residue number reindexed from 1)
H151 W188 H210 R239 H244 V246 Y253 E263 R289
Annotation score
1
Enzymatic activity
Catalytic site (original residue number in PDB)
H155 C200 H214 H248 Y257 E267
Catalytic site (residue number reindexed from 1)
H151 C196 H210 H244 Y253 E263
Enzyme Commision number
?
Gene Ontology
Molecular Function
GO:0046872
metal ion binding
GO:0051213
dioxygenase activity
View graph for
Molecular Function
External links
PDB
RCSB:5bwh
,
PDBe:5bwh
,
PDBj:5bwh
PDBsum
5bwh
PubMed
26485328
UniProt
Q45135
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