Structure of PDB 5a88 Chain D Binding Site BS02

Receptor Information
>5a88 Chain D (length=137) Species: 1697 (Corynebacterium ammoniagenes) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
HFYVTGPVVRGGFPTANQYFHDTVALPADGVYAGWLTILPTEAPVSGNME
PEVAYAAAISVGTNQRSVESFVLDRDADLYGHDVKVEFVDHVRAMEKFDS
VEQLLEVMAKDVQKTRTLLAQDVQAHKMAPETYFLQA
Ligand information
Ligand IDCA
InChIInChI=1S/Ca/q+2
InChIKeyBHPQYMZQTOCNFJ-UHFFFAOYSA-N
SMILES
SoftwareSMILES
CACTVS 3.341[Ca++]
ACDLabs 10.04
OpenEye OEToolkits 1.5.0
[Ca+2]
FormulaCa
NameCALCIUM ION
ChEMBL
DrugBankDB14577
ZINC
PDB chain5a88 Chain D Residue 1338 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
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PDB5a88 Structural Insights Into the Synthesis of Fmn in Prokaryotic Organisms.
Resolution2.08 Å
Binding residue
(original residue number in PDB)
T208 N210
Binding residue
(residue number reindexed from 1)
T15 N17
Annotation score1
Enzymatic activity
Enzyme Commision number 2.7.1.26: riboflavin kinase.
2.7.7.2: FAD synthase.
Gene Ontology
Molecular Function
GO:0008531 riboflavin kinase activity
Biological Process
GO:0009231 riboflavin biosynthetic process

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Molecular Function

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Biological Process
External links
PDB RCSB:5a88, PDBe:5a88, PDBj:5a88
PDBsum5a88
PubMed26627660
UniProtQ59263|RIBF_CORAM Bifunctional riboflavin kinase/FMN adenylyltransferase (Gene Name=ribF)

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