Structure of PDB 4ysz Chain D Binding Site BS02
Receptor Information
>4ysz Chain D (length=129) Species:
6253
(Ascaris suum) [
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TSAAVTGAAPPQFDPIAAEKGFKPLHSHGTLFKIERYFAAAMVPLIPAAY
FIHGREMDLCLALALTLHVHWGVWGVVNDYGRPFVLGDTLAAAVRVGAYI
FTACLLAGLLYFNEHDVGLTRAFEMVWEL
Ligand information
Ligand ID
12J
InChI
InChI=1S/C16H16INO2/c1-11(2)20-13-7-5-6-12(10-13)18-16(19)14-8-3-4-9-15(14)17/h3-11H,1-2H3,(H,18,19)
InChIKey
NBAUMFNNRDRNGY-UHFFFAOYSA-N
SMILES
Software
SMILES
OpenEye OEToolkits 1.7.0
CC(C)Oc1cccc(c1)NC(=O)c2ccccc2I
CACTVS 3.352
CC(C)Oc1cccc(NC(=O)c2ccccc2I)c1
Formula
C16 H16 I N O2
Name
2-iodo-N-[3-(1-methylethoxy)phenyl]benzamide;
2-Iodo-N-(3-isopropoxyphenyl)benzamide
ChEMBL
DrugBank
ZINC
ZINC000014796278
PDB chain
4ysz Chain C Residue 202 [
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Receptor-Ligand Complex Structure
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PDB
4ysz
Structural Insights into the Molecular Design of Flutolanil Derivatives Targeted for Fumarate Respiration of Parasite Mitochondria
Resolution
3.3 Å
Binding residue
(original residue number in PDB)
D106 Y107
Binding residue
(residue number reindexed from 1)
D79 Y80
Annotation score
1
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Molecular Function
GO:0005515
protein binding
GO:0008177
succinate dehydrogenase (quinone) activity
GO:0020037
heme binding
GO:0046872
metal ion binding
GO:0048039
ubiquinone binding
Biological Process
GO:0006099
tricarboxylic acid cycle
GO:0006121
mitochondrial electron transport, succinate to ubiquinone
Cellular Component
GO:0005737
cytoplasm
GO:0005739
mitochondrion
GO:0005740
mitochondrial envelope
GO:0005743
mitochondrial inner membrane
GO:0016020
membrane
GO:0031966
mitochondrial membrane
GO:0043231
intracellular membrane-bounded organelle
GO:0045273
respiratory chain complex II (succinate dehydrogenase)
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Molecular Function
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Biological Process
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Cellular Component
External links
PDB
RCSB:4ysz
,
PDBe:4ysz
,
PDBj:4ysz
PDBsum
4ysz
PubMed
26198225
UniProt
P92507
|DHSD1_ASCSU Succinate dehydrogenase [ubiquinone] cytochrome b small subunit 1, mitochondrial (Gene Name=SDHD1)
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