Structure of PDB 4dwz Chain D Binding Site BS02

Receptor Information
>4dwz Chain D (length=269) Species: 523850 (Thermococcus onnurineus NA1) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
MIAHLINTDIGNRGVLKVYLDYRRKNFNFLHNSTKMFLDNLERVLIVTGF
PIPPMMVAETDGPPGALAIYRAVEMLGGKAEILTYSEVEKALEPFGVSLA
RTPEPEDYSLIISVETPGRAADGRYYSMSALEIKRDPLDGIFLKARALGI
PTIGVGDGGNEIGMGKIRELVVGHVPHGEKIASVVETDELIVSAVSNWGA
YGLVAQASIEVGRNLLEGWDERRVIEAISSAGLIDGVSKTLAPSVDGIRL
MVHEGIVELLKAVVDEAIL
Ligand information
Ligand IDZN
InChIInChI=1S/Zn/q+2
InChIKeyPTFCDOFLOPIGGS-UHFFFAOYSA-N
SMILES
SoftwareSMILES
CACTVS 3.341[Zn++]
ACDLabs 10.04
OpenEye OEToolkits 1.5.0
[Zn+2]
FormulaZn
NameZINC ION
ChEMBLCHEMBL1236970
DrugBankDB14532
ZINC
PDB chain4dwz Chain D Residue 302 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
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PDB4dwz Experimental phasing using zinc anomalous scattering
Resolution2.7 Å
Binding residue
(original residue number in PDB)
D61 D157 D246
Binding residue
(residue number reindexed from 1)
D61 D157 D246
Annotation score1
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0046872 metal ion binding
GO:0047820 D-glutamate cyclase activity
Biological Process
GO:0006536 glutamate metabolic process

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Molecular Function

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Biological Process
External links
PDB RCSB:4dwz, PDBe:4dwz, PDBj:4dwz
PDBsum4dwz
PubMed22948927
UniProtB6YTD8

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