Structure of PDB 4au3 Chain D Binding Site BS02

Receptor Information

>4au3 Chain D (length=372) Species: 9615 (Canis lupus familiaris)

MLSPKAATLAERSAGLAFSLYQAMAKDQAVENILLSPVVVASSLGLVSLG
GKATTASQAKAVLSAEQLRDEEVHAGLGELLRSLSNSTARNVTWKLGSRL
YGPSSVSFAEDFVRSSKQHYNCEHSKINFRDKRSALQSINEWAAQTTDGK
LPEVTKDVERTDGALLVNAMFFKPHWDEKFHHKMVDNRGFMVTRSYTVGV
TMMHRTGLYNYYDDEKEKLQIVEMPLAHKLSSLIILMPHHVEPLERLEKL
LTKEQLKIWMGKMQKKAVAISLPKGVVEVTHDLQKHLAGLGLTEAIDKNK
ADLSRMSGKKDLYLASVFHATAFEWDTEGNPFELRSPKLFYADHPFIFLV
RDTQSGSLLFIGRLVRPKGDKM

Ligand information

>4au3 Chain J (length=15) Species: 9606 (Homo sapiens)

PPGPPGPPGPRGPPG

Receptor-Ligand Complex Structure

Structure summary

• PDB: 4au3 Molecular Basis for the Action of the Collagen-Specific Chaperone Hsp47/Serpinh1 and its Structure-Specific Client Recognition.
• Resolution: 2.78 Å
• Binding residue (original residue number in PDB): M218 R222 M225 R228 H238 Y383 D385
• Binding residue (residue number reindexed from 1): M184 R188 M191 R194 H204 Y341 D343

Gene Ontology

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UnboundLocalError

Python 3.6.8: /usr/bin/python3 Fri Nov 15 14:20:46 2024

A problem occurred in a Python script. Here is the sequence of function calls leading up to the error, in the order they occurred.

 /var/www/html/BioLiP/pdb.cgi in <module>()

   1435     title=pdb2title(pdbid)

   1436     if bs.startswith("BS"):

=> 1437         pubmed,uniprot=display_interaction(pdbid,asym_id,bs,title)

   1438     else:

   1439         if lig3:

pubmed = '', uniprot = '', display_interaction = <function display_interaction>, pdbid = '4au3', asym_id = 'D', bs = 'BS02', title = 'Molecular Basis for the Action of the Collagen-S...h1 and its Structure-Specific Client Recognition.'

 /var/www/html/BioLiP/pdb.cgi in display_interaction(pdbid='4au3', asym_id='D', bs='BS02', title='Molecular Basis for the Action of the Collagen-S...h1 and its Structure-Specific Client Recognition.')

   1295         display_ec(ec,csaOrig,csaRenu)

   1296     if go:

=> 1297         display_go(go,uniprot,pdbid,asym_id)

   1298     return pubmed,uniprot

   1299 

global display_go = <function display_go>, go = '0004867,0005518,0005615', uniprot = '', pdbid = '4au3', asym_id = 'D'

 /var/www/html/BioLiP/pdb.cgi in display_go(go='0004867,0005518,0005615', uniprot='', pdbid='4au3', asym_id='D')

    480         '''.replace("$namespace_link",namespace_link

    481           ).replace("$namespace",namespace

=>  482           ).replace("$uniprot",u

    483         ))

    484         for l,(term,name) in enumerate(go2aspect[Aspect]):

u undefined

UnboundLocalError: local variable 'u' referenced before assignment
      args = ("local variable 'u' referenced before assignment",)
      with_traceback = <built-in method with_traceback of UnboundLocalError object>