Structure of PDB 3tw6 Chain D Binding Site BS02

Receptor Information
>3tw6 Chain D (length=1129) Species: 347834 (Rhizobium etli CFN 42) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
GPISKILVANRSEIAIRVFRAANELGIKTVAIWAEEDKLALHRFKADESY
QVGRGPHLARDLGPIESYLSIDEVIRVAKLSGADAIHPGYGLLSESPEFV
DACNKAGIIFIGPKADTMRQLGNKVAARNLAISVGVPVVPATEPLPDDMA
EVAYPVMLKASWMRVIRSELAKEVTEAKREAMAAFGKDEVYLEKLVERAR
HVESQILGDTHGNVVHLFERDCSVQRRNQKVVERAPAPYLSEAQRQELAA
YSLKIAGATNYIGAGTVEYLMDADTGKFYFIEVNPRIQVEHTVTEVVTGI
DIVKAQIHILDGAAIGTPQSGVPNQEDIRLNGHALQCRVTTEDPEHNFIP
DYGRITAYRSASGFGIRLDGGTSYSGAIITRYYDPLLVKVTAWAPNPLEA
ISRMDRALREFRIRGVATNLTFLEAIIGHPKFRDNSYTTRFIDTTPELFQ
QVKRQDRATKLLTYLADVTVNGHPEAKDRPKPLENAARPVVPYANGNGVK
DGTKQLLDTLGPKKFGEWMRNEKRVLLTDTTMRDGHQSLLATRMRTYDIA
RIAGTYSHALPNLLSLECWGGATFDVSMRFLTEDPWERLALIREGAPNLL
LQMLLRGANGVGYTNYPDNVVKYFVRQAAKGGIDLFRVFDCLNWVENMRV
SMDAIAEENKLCEAAICYTGDILNSARPKYDLKYYTNLAVELEKAGAHII
AVKDMAGLLKPAAAKVLFKALREATGLPIHFHTHDTSGIAAATVLAAVEA
GVDAVDAAMDALSGNTSQPCLGSIVEALSGSERDPGLDPAWIRRISFYWE
AVRNQYAAFESDLKGPASEVYLHEMPGGQFTNLKEQARSLGLETRWHQVA
QAYADANQMFGDIVKVAPSSKVVGDMALMMVSQDLTVADVVSPDREVSFP
ESVVSMLKGDLGQPPSGWPEALQKKALKGEKPYTVRPGSLLKEADLDAER
KVIEKKLEREVSDFEFASYLMYPKVFTDFALASDTYGPVSVLPTPAYFYG
LADGEELFADIEKGKTLVIVNQAVSATDSQGMVTVFFELNGQPRRIKVPD
RAHGATGAAVRRKAEGNAAHVGAPMPGVISRVFVSSGQAVNDVLVSIEAM
KMETAIHAEKDGTIAEVLVKAGDQIDAKD
Ligand information
Ligand IDZN
InChIInChI=1S/Zn/q+2
InChIKeyPTFCDOFLOPIGGS-UHFFFAOYSA-N
SMILES
SoftwareSMILES
CACTVS 3.341[Zn++]
ACDLabs 10.04
OpenEye OEToolkits 1.5.0		[Zn+2]
FormulaZn
NameZINC ION
ChEMBLCHEMBL1236970
DrugBankDB14532
ZINC
PDB chain3tw6 Chain D Residue 2001 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB3tw6 Interaction between the biotin carboxyl carrier domain and the biotin carboxylase domain in pyruvate carboxylase from Rhizobium etli.
Resolution2.4 Å
Binding residue
(original residue number in PDB)		D549 K718 H747 H749
Binding residue
(residue number reindexed from 1)		D534 K703 H732 H734
Annotation score1
Enzymatic activity
Catalytic site (original residue number in PDB) K124 K166 H216 R242 T281 E283 E297 N299 R301 E305 R353 D549 D655 K718 H747 H749 A882
Catalytic site (residue number reindexed from 1) K124 K159 H201 R227 T266 E268 E282 N284 R286 E290 R338 D534 D640 K703 H732 H734 A867
Enzyme Commision number 6.4.1.1: pyruvate carboxylase.
Gene Ontology
Molecular Function
GO:0003824 catalytic activity
GO:0004736 pyruvate carboxylase activity
GO:0005524 ATP binding
GO:0016874 ligase activity
GO:0046872 metal ion binding
Biological Process
GO:0006090 pyruvate metabolic process
GO:0006094 gluconeogenesis
Cellular Component
GO:0005737 cytoplasm

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:3tw6, PDBe:3tw6, PDBj:3tw6
PDBsum3tw6
PubMed21958016
UniProtQ2K340

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