Structure of PDB 3mgq Chain D Binding Site BS02
Receptor Information
>3mgq Chain D (length=100) Species:
8355
(Xenopus laevis) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
GKKRRKTRKESYAIYVYKVLKQVHPDTGISSKAMSIMNSFVNDVFERIAG
EASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSAK
Ligand information
>3mgq Chain J (length=147) [
Search DNA sequence
] [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
atcaatatccacctgcagatactaccaaaagtgtatttggaaactgctcc
atcaaaaggcatgttcagctggattccagctgaacatgccttttgatgga
gcagtttccaaatacacttttggtagtatctgcaggtggatattgat
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
3mgq
Perturbations in nucleosome structure from heavy metal association.
Resolution
2.65 Å
Binding residue
(original residue number in PDB)
G23 K25 R26 R27 K31 E32 S33 I36
Binding residue
(residue number reindexed from 1)
G1 K3 R4 R5 K9 E10 S11 I14
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Molecular Function
GO:0003677
DNA binding
GO:0005515
protein binding
GO:0030527
structural constituent of chromatin
GO:0046982
protein heterodimerization activity
Cellular Component
GO:0000786
nucleosome
GO:0005634
nucleus
GO:0005694
chromosome
View graph for
Molecular Function
View graph for
Cellular Component
External links
PDB
RCSB:3mgq
,
PDBe:3mgq
,
PDBj:3mgq
PDBsum
3mgq
PubMed
20494975
UniProt
P02281
|H2B11_XENLA Histone H2B 1.1
[
Back to BioLiP
]