Structure of PDB 3lz1 Chain D Binding Site BS02
Receptor Information
>3lz1 Chain D (length=95) Species:
8355
(Xenopus laevis) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
KTRKESYAIYVYKVLKQVHPDTGISSKAMSIMNSFVNDVFERIAGEASRL
AHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSAK
Ligand information
>3lz1 Chain J (length=145) [
Search DNA sequence
] [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
atcagaatcccggtgccgaggccgctcaattggtcgtagacagctctagc
accgcttaaacgcacgtacgcgctgtcccccgcgttttaaccgccaaggg
gattactccctagtctccaggcacgtgtcagatatatacatcgat
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
3lz1
Crystal structures of nucleosome core particles containing the '601' strong positioning sequence
Resolution
2.5 Å
Binding residue
(original residue number in PDB)
K28 T29 R30 K31 E32 Y37
Binding residue
(residue number reindexed from 1)
K1 T2 R3 K4 E5 Y10
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Molecular Function
GO:0003677
DNA binding
GO:0005515
protein binding
GO:0030527
structural constituent of chromatin
GO:0046982
protein heterodimerization activity
Cellular Component
GO:0000786
nucleosome
GO:0005634
nucleus
GO:0005694
chromosome
View graph for
Molecular Function
View graph for
Cellular Component
External links
PDB
RCSB:3lz1
,
PDBe:3lz1
,
PDBj:3lz1
PDBsum
3lz1
PubMed
20800598
UniProt
P02281
|H2B11_XENLA Histone H2B 1.1
[
Back to BioLiP
]