Structure of PDB 3e5u Chain D Binding Site BS02
Receptor Information
>3e5u Chain D (length=220) Species:
272564
(Desulfitobacterium hafniense DCB-2) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
DFCGAIIPDNFFPIEKLRNYTQMGLIRDFAKGSAVIMPGEEITSMIFLVE
GKIKLDIIFEDGSEKLLYYAGGNSLIGKLYPTGNNIYATAMEPTRTCWFS
EKSLRTVFRTDEDMIFEIFKNYLTKVAYYARQVAEMNTYNPTIRILRLFY
ELCSSQGKRVGDTYEITMPLSQKSIGEITGVHHVTVSRVLASLKRENILD
KKKNKIIVYNLGELKHLSEQ
Ligand information
Ligand ID
3C4
InChI
InChI=1S/C8H7ClO3/c9-6-3-5(4-8(11)12)1-2-7(6)10/h1-3,10H,4H2,(H,11,12)
InChIKey
IYTUKSIOQKTZEG-UHFFFAOYSA-N
SMILES
Software
SMILES
ACDLabs 10.04
Clc1cc(ccc1O)CC(=O)O
OpenEye OEToolkits 1.5.0
c1cc(c(cc1CC(=O)O)Cl)O
CACTVS 3.341
OC(=O)Cc1ccc(O)c(Cl)c1
Formula
C8 H7 Cl O3
Name
(3-CHLORO-4-HYDROXYPHENYL)ACETIC ACID
ChEMBL
CHEMBL592010
DrugBank
ZINC
ZINC000000407042
PDB chain
3e5u Chain D Residue 502 [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
3e5u
Molecular basis of halorespiration control by CprK, a CRP-FNR type transcriptional regulator
Resolution
1.83 Å
Binding residue
(original residue number in PDB)
Y76 I84 G85 K86 T90 N92 K133
Binding residue
(residue number reindexed from 1)
Y68 I76 G77 K78 T82 N84 K125
Annotation score
1
Binding affinity
PDBbind-CN
: -logKd/Ki=5.85,Kd=1.4uM
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Molecular Function
GO:0003677
DNA binding
Biological Process
GO:0006355
regulation of DNA-templated transcription
View graph for
Molecular Function
View graph for
Biological Process
External links
PDB
RCSB:3e5u
,
PDBe:3e5u
,
PDBj:3e5u
PDBsum
3e5u
PubMed
18717788
UniProt
B8FW11
[
Back to BioLiP
]