Structure of PDB 3ded Chain D Binding Site BS02

Receptor Information
>3ded Chain D (length=86) Species: 536 (Chromobacterium violaceum) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
DEIVQREDGSWLVDGMVSLDRFREFFELEAPLPGEAGGNIHTLAGVMLYQ
LGRVPSVTDRFEWNGFSFEVVDMDRTRVDKILVQRH
Ligand information
Ligand IDCA
InChIInChI=1S/Ca/q+2
InChIKeyBHPQYMZQTOCNFJ-UHFFFAOYSA-N
SMILES
SoftwareSMILES
CACTVS 3.341[Ca++]
ACDLabs 10.04
OpenEye OEToolkits 1.5.0
[Ca+2]
FormulaCa
NameCALCIUM ION
ChEMBL
DrugBankDB14577
ZINC
PDB chain3ded Chain D Residue 509 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
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PDB3ded Crystal structure of C-terminal domain of Probable hemolysin from Chromobacterium violaceum
Resolution2.14 Å
Binding residue
(original residue number in PDB)
D412 M413 D414
Binding residue
(residue number reindexed from 1)
D72 M73 D74
Annotation score4
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0050660 flavin adenine dinucleotide binding

View graph for
Molecular Function
External links
PDB RCSB:3ded, PDBe:3ded, PDBj:3ded
PDBsum3ded
PubMed
UniProtQ7P1I2

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