Structure of PDB 2j6x Chain D Binding Site BS02

Receptor Information

>2j6x Chain D (length=353) Species: 1377 (Aerococcus viridans) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]

YNAPSEIKYIDVVNTYDLEEEASKVVPHGGFNYIAGASGDEWTKRANDRA
WKHKLLYPRLAQDVEAPDTSTEILGHKIKAPFIMAPIAAHGLAHTTKEAG
TARAVSEFGTIMSISAYSGATFEEISEGLNGGPRWFQIYMAKDDQQNRDI
LDEAKSDGATAIILTADSTVSGNRDRDVKNKFVYPFGMPIVNIYGASKQK
ISPRDIEEIAAHSGLPVFVKGIQHPEDADMAIKAGASGIWVSNHGARQLY
EAPGSFDTLPAIAERVNKRVPIVFDSGVRRGEHVAKALASGADVVALGRP
VLFGLALGGWQGAYSVLDYFQKDLTRVMQLTGSQNVEDLKGLDLFDNPYG
YEY

Ligand information

Ligand ID

InChI

InChI=1S/Zn/q+2

InChIKey

PTFCDOFLOPIGGS-UHFFFAOYSA-N

SMILES

Software	SMILES
CACTVS 3.341	[Zn++]
ACDLabs 10.04 OpenEye OEToolkits 1.5.0	[Zn+2]

Formula

Name

ZINC ION

PDB chain

2j6x Chain D Residue 1376 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]

Receptor-Ligand Complex Structure

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Structure summary

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PDB	2j6x The 2.1 A Structure of Aerococcus Viridans L-Lactate Oxidase (Lox).
Resolution	2.1 Å
Binding residue (original residue number in PDB)	E229 H233
Binding residue (residue number reindexed from 1)	E208 H212
Annotation score	1

Enzymatic activity

Catalytic site (original residue number in PDB)	S122 Y146 T172 D174 K241 H265
Catalytic site (residue number reindexed from 1)	S115 Y139 T165 D167 K220 H244
Enzyme Commision number	1.1.3.-

Gene Ontology

	Molecular Function
GO:0000166	nucleotide binding
GO:0004459	L-lactate dehydrogenase activity
GO:0010181	FMN binding
GO:0016491	oxidoreductase activity
GO:0046872	metal ion binding

View graph for
Molecular Function

External links

PDB	RCSB:2j6x, PDBe:2j6x, PDBj:2j6x
PDBsum	2j6x
PubMed	17142893
UniProt	Q44467\|LOX_AERVM L-lactate oxidase

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