Structure of PDB 1wn5 Chain D Binding Site BS02
Receptor Information
>1wn5 Chain D (length=125) Species:
33178
(Aspergillus terreus) [
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PLSQEESTLIERATATINSIPISEDYSVASAALSSDGRIFTGVNVYHFTG
GPCAELVVLGTAAAAAAGNLTCIVAIGNENRGILSPCGRCRQVLLDLHPG
IKAIVKDSDGQPTAVGIRELLPSGY
Ligand information
Ligand ID
CAC
InChI
InChI=1S/C2H7AsO2/c1-3(2,4)5/h1-2H3,(H,4,5)/p-1
InChIKey
OGGXGZAMXPVRFZ-UHFFFAOYSA-M
SMILES
Software
SMILES
OpenEye OEToolkits 1.7.0
C[As](=O)(C)[O-]
CACTVS 3.370
C[As](C)([O-])=O
ACDLabs 12.01
[O-][As](=O)(C)C
Formula
C2 H6 As O2
Name
CACODYLATE ION;
dimethylarsinate
ChEMBL
DrugBank
ZINC
PDB chain
1wn5 Chain D Residue 2004 [
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Receptor-Ligand Complex Structure
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PDB
1wn5
Crystal structures of blasticidin S deaminase (BSD): implications for dynamic properties of catalytic zinc
Resolution
1.8 Å
Binding residue
(original residue number in PDB)
C54 E56 S86 P87 C88
Binding residue
(residue number reindexed from 1)
C53 E55 S85 P86 C87
Annotation score
1
Enzymatic activity
Enzyme Commision number
3.5.4.23
: blasticidin-S deaminase.
Gene Ontology
Molecular Function
GO:0003824
catalytic activity
GO:0004126
cytidine deaminase activity
GO:0008270
zinc ion binding
GO:0016787
hydrolase activity
GO:0042802
identical protein binding
GO:0046872
metal ion binding
GO:0047711
blasticidin-S deaminase activity
Biological Process
GO:0009972
cytidine deamination
GO:0046677
response to antibiotic
GO:0055086
nucleobase-containing small molecule metabolic process
GO:0072527
pyrimidine-containing compound metabolic process
GO:1901135
carbohydrate derivative metabolic process
Cellular Component
GO:0005737
cytoplasm
GO:0005829
cytosol
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Molecular Function
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Cellular Component
External links
PDB
RCSB:1wn5
,
PDBe:1wn5
,
PDBj:1wn5
PDBsum
1wn5
PubMed
17959604
UniProt
P0C2P0
|BSD_ASPTE Blasticidin-S deaminase (Gene Name=bsd)
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