Structure of PDB 1qgh Chain D Binding Site BS02
Receptor Information
>1qgh Chain D (length=150) Species:
1642
(Listeria innocua) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
VDTKEFLNHQVANLNVFTVKIHQIHWYMRGHNFFTLHEKMDDLYSEFGEQ
MDEVAERLLAIGGSPFSTLKEFLENASVEEAPYTKPKTMDQLMEDLVGTL
ELLRDEYKQGIELTDKEGDDVTNDMLIAFKASIDKHIWMFKAFLGKAPLE
Ligand information
Ligand ID
FE
InChI
InChI=1S/Fe/q+3
InChIKey
VTLYFUHAOXGGBS-UHFFFAOYSA-N
SMILES
Software
SMILES
ACDLabs 10.04
CACTVS 3.341
OpenEye OEToolkits 1.5.0
[Fe+3]
Formula
Fe
Name
FE (III) ION
ChEMBL
DrugBank
DB13949
ZINC
PDB chain
1qgh Chain L Residue 157 [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
1qgh
The dodecameric ferritin from Listeria innocua contains a novel intersubunit iron-binding site.
Resolution
2.35 Å
Binding residue
(original residue number in PDB)
D58 E62
Binding residue
(residue number reindexed from 1)
D52 E56
Annotation score
5
Enzymatic activity
Enzyme Commision number
1.16.-.-
Gene Ontology
Molecular Function
GO:0008199
ferric iron binding
GO:0016491
oxidoreductase activity
GO:0016722
oxidoreductase activity, acting on metal ions
GO:0046872
metal ion binding
Biological Process
GO:0006879
intracellular iron ion homeostasis
Cellular Component
GO:0005737
cytoplasm
View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB
RCSB:1qgh
,
PDBe:1qgh
,
PDBj:1qgh
PDBsum
1qgh
PubMed
10625425
UniProt
P80725
|DPS_LISIN DNA protection during starvation protein (Gene Name=dps)
[
Back to BioLiP
]