Structure of PDB 1fat Chain D Binding Site BS02

Receptor Information
>1fat Chain D (length=231) Species: 3885 (Phaseolus vulgaris) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
SNDIYFNFQRFNETNLILQRDASVSSSGQLRLTNLNGEPRVGSLGRAFYS
APIQIWDNTTGTVASFATSFTFNIQVPNNAGPADGLAFALVPVGSQPKDK
GGFLGLFDGSNSNFHTVAVEFDTLYNKDWDPTERHIGIDVNSIRSIKTTR
WDFVNGENAEVLITYDSSTNLLVASLVYPSQKTSFIVSDTVDLKSVLPEW
VSVGFSATTGINKGNVETNDVLSWSFASKLS
Ligand information
Ligand IDCA
InChIInChI=1S/Ca/q+2
InChIKeyBHPQYMZQTOCNFJ-UHFFFAOYSA-N
SMILES
SoftwareSMILES
CACTVS 3.341[Ca++]
ACDLabs 10.04
OpenEye OEToolkits 1.5.0		[Ca+2]
FormulaCa
NameCALCIUM ION
ChEMBL
DrugBankDB14577
ZINC
PDB chain1fat Chain D Residue 255 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB1fat The crystallographic structure of phytohemagglutinin-L.
Resolution2.8 Å
Binding residue
(original residue number in PDB)		D124 L126 N128 D132
Binding residue
(residue number reindexed from 1)		D122 L124 N126 D130
Annotation score4
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0005537 D-mannose binding
GO:0030246 carbohydrate binding
GO:0090729 toxin activity
Biological Process
GO:0006952 defense response
GO:0035821 modulation of process of another organism

View graph for
Molecular Function
View graph for
Biological Process
External links
PDB RCSB:1fat, PDBe:1fat, PDBj:1fat
PDBsum1fat
PubMed8702788
UniProtP05087|PHAL_PHAVU Leucoagglutinating phytohemagglutinin (Gene Name=DLEC2)

[Back to BioLiP]