Structure of PDB 1d5y Chain D Binding Site BS02
Receptor Information
>1d5y Chain D (length=288) Species:
562
(Escherichia coli) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
QAGIIRDLLIWLEGHLDQPLSLDNVAAKAGYSKWHLQRMFKDVTGHAIGA
YIRARRLSKSAVALRLTARPILDIALQYRFDSQQTFTRAFKKQFAQTPAL
YRRSPEWSAFGIRPPLRLGEFTMPEHKFVTLEDTPLIGVTQSYSCSLEQI
SDFRHEMRYQFWHDFLGNAPTIPPVLYGLNETRPSQDKDDEQEVFYTTAL
AQDQADGYVLTGHPVMLQGGEYVMFTYEGLGTGVQEFILTVYGTCMPMLN
LTRRKGQDIERYYPAEDDRPINLRCELLIPIRRKLAAA
Ligand information
>1d5y Chain P (length=21) [
Search DNA sequence
] [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
actttgacattcagtgctgtc
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
1d5y
Crystal structure of the Escherichia coli Rob transcription factor in complex with DNA.
Resolution
2.7 Å
Binding residue
(original residue number in PDB)
L24 D25 G51
Binding residue
(residue number reindexed from 1)
L22 D23 G49
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Molecular Function
GO:0003677
DNA binding
GO:0003700
DNA-binding transcription factor activity
GO:0043565
sequence-specific DNA binding
Biological Process
GO:0006355
regulation of DNA-templated transcription
Cellular Component
GO:0005829
cytosol
View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB
RCSB:1d5y
,
PDBe:1d5y
,
PDBj:1d5y
PDBsum
1d5y
PubMed
10802742
UniProt
P0ACI0
|ROB_ECOLI Right origin-binding protein (Gene Name=rob)
[
Back to BioLiP
]