Structure of PDB 8pvk Chain Cz Binding Site BS02
Receptor Information
>8pvk Chain Cz (length=101) Species:
759272
(Thermochaetoides thermophila DSM 1495) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
KNLGMRKNGQVWLPAKKAFRPTKGLTSWELRVKKRQEQAAMKAKEREMKE
EKEAERQKRIQAIKERRKKKEEKERYEQLAAKMHKKRLERLKRKEKRNKL
L
Ligand information
>8pvk Chain C4 (length=119) [
Search RNA sequence
] [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
acguacgaccauacccaguggaaagcacggcaucccguccgcucugcccu
aguuaagccacugagggcccgguuaguaguugggucggugacgaccagcg
aaucccggguguuguacgu
<<<<<<<<<....<<<<<<<<.....<<<<<<............>>>>..
.>>....>>>>>>.>><<<<<<......<<<<.<<<<....>>>>>>>>.
....>>>>>>>>>>>>>>>
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
8pvk
Structural insights into coordinating 5S RNP rotation with ITS2 pre-RNA processing during ribosome formation.
Resolution
2.55 Å
Binding residue
(original residue number in PDB)
H104 K106 R107 R110 R113
Binding residue
(residue number reindexed from 1)
H84 K86 R87 R90 R93
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Biological Process
GO:0006364
rRNA processing
GO:0042254
ribosome biogenesis
Cellular Component
GO:0005634
nucleus
GO:0005730
nucleolus
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB
RCSB:8pvk
,
PDBe:8pvk
,
PDBj:8pvk
PDBsum
8pvk
PubMed
37921038
UniProt
G0SCP3
[
Back to BioLiP
]