Structure of PDB 8pvk Chain Ce Binding Site BS02

Receptor Information
>8pvk Chain Ce (length=313) Species: 759272 (Thermochaetoides thermophila DSM 1495) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
VLKPLTGDNTEAPKQHSQPSRKGKKAWRKNIDLTEVEQGLEELNEQIIKG
GLKADEIIAQRSALPAVSVRKRAGTYDPWAPDPLKKPKTLEQKPISLAAN
GKSVPAVPKPTGGYSYNPAFTDYQQRLMEESEKAIEAERKRLQELELERQ
KMEAAARSAAEAEAAEARAEKPRRKTKAERNRIKRRKEEERKRKHEEAMK
RKQQQLEQAKKIAAEVEERERQLALQKIEEGDDTVLRRKQLGKFKLPEKD
LELVLPDELEDSLRRLKPEGNLLKDRYRSMIVRGKLEARRKIPFRKQAKT
KLTEKWTFKDFRI
Ligand information
>8pvk Chain C2 (length=156) [Search RNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
aaacuuucaacaacggaucucuugguucuggcaucgaugaagaacgcagc
gaaaugcgauaaguaaugugaauugcagaauuccgugaaucaucgaaucu
uugaacgcacauugcgcccgccgguauuccggcgggcaugccuguucgag
cgucau
.........................................<<<<<<<<<
....>>>>.....<.<<<......>>..............>>>..>...>
>>....<<.....>><<<<<<<<<....>>>>>>>>>.............
......
Receptor-Ligand Complex Structure
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PDB8pvk Structural insights into coordinating 5S RNP rotation with ITS2 pre-RNA processing during ribosome formation.
Resolution2.55 Å
Binding residue
(original residue number in PDB)		P180 P182 K184 T188 E434 K435 W436
Binding residue
(residue number reindexed from 1)		P81 P83 K85 T89 E304 K305 W306
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0008097 5S rRNA binding
Biological Process
GO:0000027 ribosomal large subunit assembly
GO:0006364 rRNA processing
GO:0042254 ribosome biogenesis
Cellular Component
GO:0005634 nucleus
GO:0005654 nucleoplasm
GO:0005730 nucleolus

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:8pvk, PDBe:8pvk, PDBj:8pvk
PDBsum8pvk
PubMed37921038
UniProtG0S495

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