Structure of PDB 8pv6 Chain Ce Binding Site BS02

Receptor Information
>8pv6 Chain Ce (length=302) Species: 759272 (Thermochaetoides thermophila DSM 1495) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
VLKPLTGDNTEAPKQHSQPSRKGKKAWRKNIDLTEVEQGLEELNEQIIKA
DEIIAQRSALPAVSVRKRATYDPWAPDPLKKPKTLEQKPISLAANGKSVP
AVPKPTGGYSYNPAFTDYQQRLMEESEKAIEAERKRLQELELERQKMEAA
ARSAAEAEAAPRRKTKAERNRIKRRKEEERKRKHEEAMKRKQQQLEQAKK
IAAEVEERERQLALQKIEEGDDTVLRRKQLGKFKLPEKDLELVLPDELED
SLRRLKPEGNLLKDRYRSMIVRGKLEARRKIPFRKQAKTKLTEKWTFKDF
RI
Ligand information
>8pv6 Chain C2 (length=156) [Search RNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
aaacuuucaacaacggaucucuugguucuggcaucgaugaagaacgcagc
gaaaugcgauaaguaaugugaauugcagaauuccgugaaucaucgaaucu
uugaacgcacauugcgcccgccgguauuccggcgggcaugccuguucgag
cgucau
.........................................<<<<<<<<<
....>>>>.....<.<<<......>>..............>>>..>...>
>>....<<.....>><<<<<<<<<....>>>>>>>>>.............
......
Receptor-Ligand Complex Structure
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PDB8pv6 Structural insights into coordinating 5S RNP rotation with ITS2 pre-RNA processing during ribosome formation.
Resolution2.94 Å
Binding residue
(original residue number in PDB)		P180 E434 K435 W436
Binding residue
(residue number reindexed from 1)		P76 E293 K294 W295
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0008097 5S rRNA binding
Biological Process
GO:0000027 ribosomal large subunit assembly
GO:0006364 rRNA processing
GO:0042254 ribosome biogenesis
Cellular Component
GO:0005634 nucleus
GO:0005654 nucleoplasm
GO:0005730 nucleolus

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:8pv6, PDBe:8pv6, PDBj:8pv6
PDBsum8pv6
PubMed37921038
UniProtG0S495

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