Structure of PDB 8pv5 Chain Cb Binding Site BS02

Receptor Information
>8pv5 Chain Cb (length=101) Species: 759272 (Thermochaetoides thermophila DSM 1495) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
GVFAKRTMTKTRRRLRDLDQIERDLRSPRHLQQYKETKAAEDLPGLGLYY
CIECAKWFESETSLVGHRKGKPHKRRLKQLKEGAYTHEEAMAAIGYRIDN
G
Ligand information
Ligand IDZN
InChIInChI=1S/Zn/q+2
InChIKeyPTFCDOFLOPIGGS-UHFFFAOYSA-N
SMILES
SoftwareSMILES
CACTVS 3.341[Zn++]
ACDLabs 10.04
OpenEye OEToolkits 1.5.0		[Zn+2]
FormulaZn
NameZINC ION
ChEMBLCHEMBL1236970
DrugBankDB14532
ZINC
PDB chain8pv5 Chain Cb Residue 1000 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
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PDB8pv5 Structural insights into coordinating 5S RNP rotation with ITS2 pre-RNA processing during ribosome formation.
Resolution2.86 Å
Binding residue
(original residue number in PDB)		C52 C55 H68 H74
Binding residue
(residue number reindexed from 1)		C51 C54 H67 H73
Annotation score4
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0003676 nucleic acid binding
GO:0008270 zinc ion binding
GO:0046872 metal ion binding
Biological Process
GO:0042254 ribosome biogenesis
Cellular Component
GO:0005634 nucleus

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:8pv5, PDBe:8pv5, PDBj:8pv5
PDBsum8pv5
PubMed37921038
UniProtG0SB32

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