Structure of PDB 6sga Chain Ca Binding Site BS02

Receptor Information
>6sga Chain Ca (length=512) Species: 5702 (Trypanosoma brucei brucei) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
SFDAPQWDLWQSRPRSEDMDEALQPFMDMPKSLKDRRYDIPWWANPFGAW
YLQNILSLELLKLKSKTNAEKIATYRSYMRSLASGKDNTMSDDDVIRNII
KERWKTLEFGDRNAGYPCTFGDYIQFLNEWFKSLDEEGMQRLREHFDRRI
RPLLAVMSPVDILWLEALTQNSPHNKEQLQRKIAFQTSLGTPEFFDMSKR
LRYEINEDYKVRDELGPELFALWSKAPERWPPERLSKMYGLDFTLVRKIL
VWHHFKACYDACVEPDWSLPKRLFALEWIRDVRARKHGLFYGKMRFAEQK
ITFYSDRFLFRDLVNRREASYANVWEMDDPYRFLQTEQDYEDYWGDNYDV
YRRMFPEMIGRTGEPVQQYGQMPIWAGPHRQHANKSEHNWMFAEIGVNVG
HEALKKLELDPTNEKRRRFVIRQPDGTLRSAKMSEMRAWYWKEEWADFRF
WAPQMEWGIENTPSQEQYQEHVPDTTDADFRKQRRIQSRPVKWFYESHYE
REVRWPDVINAA
Ligand information
>6sga Chain CA (length=463) [Search RNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
uaaauuauggucaauuguuaguauucauauuaauuuuuuuaaauguuuua
ucauuuuauaaagguuuauuuuugaaagauuuuuuguauaaaauuuuagg
aauaguuaauaauaauuuauaauuuugauuagauuguuuuguuaaugcua
uuagauggguguggaaaaauaaaaaaaauaauuaauauauaucaauaaua
aauuaaauuaaucuauuagucagaaauggaugccagccguugcgguaauu
ucuaugcuuuuaaauauuauacaauuaucauauuaaauuguuaagugcug
auuuaaccaauaaaaauauaaauaauuuuuauuuguuuuuaaacaccauu
agguauaugcaaauauaaaauuauaguaauuauagaaauuaaaaagcacc
aauuuuuauaauaaaaauaacgugcaguaauuaauauauuuauaaaaaua
uauuuuuuuuuuu
...........................<<<<......<<<........<.
..>..........<<<.............................<....
.<<...<<<.......>>>..>>........>........<<....>>..
...>>>...........................................>
>>.........................<<<..<<.........>>....>
>>..........>>>>.......<<.<<........<<<<..........
.......>>>>..................<<<<<<<........<<<...
.>>>....>>>>>>>....>>.>>....<<.......>>.......<<<.
...<<<<......>>>>....>>>........<<<<<<<<<....>>>>>
>>>>.........
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB6sga Mitoribosomal small subunit biogenesis in trypanosomes involves an extensive assembly machinery.
Resolution3.1 Å
Binding residue
(original residue number in PDB)		F348 K352 I353 T354 F355 R369 R432
Binding residue
(residue number reindexed from 1)		F296 K300 I301 T302 F303 R317 R380
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Cellular Component
GO:0005739 mitochondrion
GO:0005763 mitochondrial small ribosomal subunit

View graph for
Cellular Component
External links
PDB RCSB:6sga, PDBe:6sga, PDBj:6sga
PDBsum6sga
PubMed31515389
UniProtQ38DR3

[Back to BioLiP]