Structure of PDB 8pvk Chain CM Binding Site BS02

Receptor Information
>8pvk Chain CM (length=217) Species: 759272 (Thermochaetoides thermophila DSM 1495) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
LVPETLLKKRKSQEKARAERAAAVIFKRAEKYVKEYREQEREKIRLARIA
KQQGAKLVFVIRIKGINKIPPKPRKILQLLRLRQINNGVFVKVTKATAEM
IKIVEPWVAYGYPNLKSVRELIYKRGYGKVNGQRIPLTDNAIIEENLGKY
GIICIEDLIHEIFTVGPNFKQAANFLWPFKLSNPNGGFRPRKFKHFIEGG
DLGNREEHINALIRAMN
Ligand information
>8pvk Chain C3 (length=82) [Search RNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
uucaaccaucaagcccugggcuuguguuggggacccgcggcugcucgcgg
gcccugaaaagcaguggcgggcgugccagccg
.........<<<<<.....>>>>>....<<<<.<<<<<<<....>>>>>>
>>>>>.........<<<<<<<..>.>>.>>>>
Receptor-Ligand Complex Structure
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PDB8pvk Structural insights into coordinating 5S RNP rotation with ITS2 pre-RNA processing during ribosome formation.
Resolution2.55 Å
Binding residue
(original residue number in PDB)		I50 F51 R53 E55 K56 R66 K68 R73 K76
Binding residue
(residue number reindexed from 1)		I25 F26 R28 E30 K31 R41 K43 R48 K51
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0003723 RNA binding
GO:0003735 structural constituent of ribosome
Biological Process
GO:0000463 maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
Cellular Component
GO:0005840 ribosome
GO:0022625 cytosolic large ribosomal subunit

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:8pvk, PDBe:8pvk, PDBj:8pvk
PDBsum8pvk
PubMed37921038
UniProtG0SFL0

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