Structure of PDB 8i9t Chain CM Binding Site BS02

Receptor Information
>8i9t Chain CM (length=187) Species: 759272 (Thermochaetoides thermophila DSM 1495) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
QVIFKRAEKYVKEYREQEREKIRLARIAKQQGSFHIPAEAKLVFVIRIKG
INKIPPKPRKILQLLRLRQINNGVFVKVTKATAEMIKIVEPWVAYGYPNL
KSVRELIYKRGYGKVNGQRIPLTDNAIIEENLGKYGIICIEDLIHEIFTV
GPNFKQAANFLWPFKLSNPNGGGNREEHINALIRAMN
Ligand information
>8i9t Chain C3 (length=98) [Search RNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
caaccaucaagcccugggcuuguguuggggacccgcggcugcucgcgggc
ccugaaaagcaguggcgggcucgcuggcgggugccagccguaaaaccc
.......<<<<<<...>>>>>>....<<<<.<<<<<<<....>>>>>>>>
>>>.........<<<<<<<<<<<<..>>>>>>.>>.>>>>........
Receptor-Ligand Complex Structure
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PDB8i9t Mechanism of 5S RNP recruitment and helicase-surveilled rRNA maturation during pre-60S biogenesis.
Resolution3.6 Å
Binding residue
(original residue number in PDB)		E55 K59 R66 R73 H82 K107
Binding residue
(residue number reindexed from 1)		E8 K12 R19 R26 H35 K60
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0003723 RNA binding
GO:0003735 structural constituent of ribosome
Biological Process
GO:0000463 maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
Cellular Component
GO:0005840 ribosome
GO:0022625 cytosolic large ribosomal subunit

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:8i9t, PDBe:8i9t, PDBj:8i9t
PDBsum8i9t
PubMed37129998
UniProtG0SFL0

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