Structure of PDB 6rxx Chain CJ Binding Site BS02

Receptor Information
>6rxx Chain CJ (length=179) Species: 209285 (Thermochaetoides thermophila) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
VRKLKYHEQKLLKKHDFINYKSDNNHRDHDVIRRYMIQKPEDYHKYNRLC
GSLRQFAHRLSLLPPDNEVRRKHETLLLDKLYDMGILSTKAKLSAVEHNV
TVSAFARRRLPVVMTRLRMAETVQAATKLIEQGHVRVGVEEVRDPAFLVT
RNMEDFVTWTVGSKIKQNIMKYRDKLDDF
Ligand information
>6rxx Chain C2 (length=229) [Search RNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
agcgacaauacuucagagaaucauuucuauaguaguuguccucucuugug
uuuccuaaaggagccacagaucccacccggguugaugaacgagauccucg
gcgccagugagguccuuuacucucgcucuaccugcaaagguggcggucgc
gugccucgucucgcggcuguauagagaguggcgaugaucuguaccccgcg
gggugggugucgauggaagucugaccggc
..................................................
..........................<<<<......<.......<<<<<<
<<<<.<<...........<<<<<<...<<<<<<....>>>>>><<<<<<<
<.<......>.>>>>>>>>....>>>>>>.........>>.<<<<<<..>
>>>>>.>>>>>>>.>>>...>...>>>>.
Receptor-Ligand Complex Structure
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PDB6rxx Thermophile 90S Pre-ribosome Structures Reveal the Reverse Order of Co-transcriptional 18S rRNA Subdomain Integration.
Resolution7.1 Å
Binding residue
(original residue number in PDB)		K11 L12 K14
Binding residue
(residue number reindexed from 1)		K10 L11 K13
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0003723 RNA binding
GO:0019843 rRNA binding
GO:0030515 snoRNA binding
Biological Process
GO:0006364 rRNA processing
GO:0042254 ribosome biogenesis
GO:0042274 ribosomal small subunit biogenesis
Cellular Component
GO:0005730 nucleolus
GO:0032040 small-subunit processome
GO:0034457 Mpp10 complex
GO:1990904 ribonucleoprotein complex

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:6rxx, PDBe:6rxx, PDBj:6rxx
PDBsum6rxx
PubMed31378463
UniProtG0SDL4

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