Structure of PDB 6v8i Chain CE Binding Site BS02

Receptor Information
>6v8i Chain CE (length=387) Species: 53369 (Dubowvirus dv80alpha) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
TITIKPPKGNGAPVPVETTLVKKVNADGVLTFDILENKYTYEVINAIGKR
WIVSHVEGENDKKEYVITVIDRKSEGDRQLVECTAREIPIDKLMIDRIYV
NVTGSFTVERYFNIVFQGTGMLFEVEGKVKSSKFENGGEGDTRLEMFKKG
LEHFGLEYKITYDKKKDRYKFVLTPFANQKASYFISDEVNANAIKLEEDA
SDFATFIRGYGNYSGEETFEHAGLVMEARSALAEIYGDIHAEPFKDGKVT
DQETMDKELQSRLKKSLKQSLSLDFLVLRESYPEADPQPGDIVQIKSTKL
GLNDLVRIVQVKTIRGINNVIVKQDVTLGEFNREQRYMKKVNTAANYVSG
LNDVNLSNPSKAAENLKSKVASIAKSTLDLMSRTDLI
Ligand information
>6v8i Chain BF (length=20) Species: 53369 (Dubowvirus dv80alpha) [Search peptide sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
DALTSIVNGRNAKRNSEYYL
Receptor-Ligand Complex Structure
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PDB6v8i Structure of the host cell recognition and penetration machinery of a Staphylococcus aureus bacteriophage.
Resolution3.7 Å
Binding residue
(original residue number in PDB)
R334 E335 Y338 M339
Binding residue
(residue number reindexed from 1)
R333 E334 Y337 M338
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0004622 lysophospholipase activity

View graph for
Molecular Function
External links
PDB RCSB:6v8i, PDBe:6v8i, PDBj:6v8i
PDBsum6v8i
PubMed32069326
UniProtA4ZFC5

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