Structure of PDB 9f9m Chain C Binding Site BS02

Receptor Information
>9f9m Chain C (length=183) Species: 9606 (Homo sapiens) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
PLELRPGEYRVLLCVDIGETRGPELLRELQRLHVTHTVRKLHVGDFVWVA
QETNPRDPANPGELVLDHIVERKRLDDLCSSIIDGRFREQKFRLKRCGLE
RRVYLVEELSLPESTLLQAVTNTQVIDGFFVKRTADIKESAAYLALLTRG
LQRLYQGHTLRSRPWGTPNPLCSLLTFSDFNAG
Ligand information
Ligand IDA1IA4
InChIInChI=1S/C16H17N3O4/c20-14-10-19(9-13(15(14)21)16(22)23)12-3-1-11(2-4-12)18-7-5-17-6-8-18/h1-4,9-10,17,20H,5-8H2,(H,22,23)
InChIKeyQDMRKYATDZSKFZ-UHFFFAOYSA-N
SMILES
SoftwareSMILES
CACTVS 3.385OC(=O)C1=CN(C=C(O)C1=O)c2ccc(cc2)N3CCNCC3
OpenEye OEToolkits 2.0.7c1cc(ccc1N2CCNCC2)N3C=C(C(=O)C(=C3)O)C(=O)O
FormulaC16 H17 N3 O4
Name5-oxidanyl-4-oxidanylidene-1-(4-piperazin-1-ylphenyl)pyridine-3-carboxylic acid
ChEMBL
DrugBank
ZINC
PDB chain9f9m Chain C Residue 603 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB9f9m Fragment-Based Discovery of Novel MUS81 Inhibitors.
Resolution2.469 Å
Binding residue
(original residue number in PDB)
D307 E333 K335 D339 R348
Binding residue
(residue number reindexed from 1)
D45 E71 K73 D77 R86
Annotation score1
External links
PDB RCSB:9f9m, PDBe:9f9m, PDBj:9f9m
PDBsum9f9m
PubMed39015284
UniProtQ96NY9|MUS81_HUMAN Crossover junction endonuclease MUS81 (Gene Name=MUS81)

[Back to BioLiP]