Structure of PDB 8zfk Chain C Binding Site BS02

Receptor Information
>8zfk Chain C (length=412) Species: 562,6239 [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
PDIPIQYELANNIMENYQKGLIPKVRKGSPINVTLSLQLYQIIQVNEPQQ
YLLLNAWAVERWVDQMLGWDPSEFDNETEIMARHDDIWLPDTTLYNSLEM
DDSASKKLTHVKLTTLGKNQGAMVELLYPTIYKISCLLNLKYFPFDTQTC
RMTFGSWSFDNSLIDYFPRTFTNGPIGLANFLENDAWSVLGTKVNREEKK
YTCCPVNYTLLHYDVVIQRKPLYYVLNLIAPTAVITFISIIGFFTSSSVH
DLRQEKITLGITTLLSMSIMIFMVSDKMPSTSTCVPLIALFYTLMITIIS
VGTLAASSVIFVQKLGSIGNPPASKTMKWTHRIAPFVLIQMPLVMKQAYA
KRAKEEKHRKRMSRNIVELEWDWVAAVLERVFLIFFTICFLFSAIGINLY
GWYIWYTENHFL
Ligand information
Ligand IDA1D8E
InChIInChI=1S/C20H13F6N3O2S/c1-18(10-28,11-31-16-8-12(9-27)2-7-15(16)19(21,22)23)29-17(30)13-3-5-14(6-4-13)32-20(24,25)26/h2-8H,11H2,1H3,(H,29,30)/t18-/m0/s1
InChIKeyWTERNLDOAPYGJD-SFHVURJKSA-N
SMILES
SoftwareSMILES
CACTVS 3.385C[C](COc1cc(ccc1C(F)(F)F)C#N)(NC(=O)c2ccc(SC(F)(F)F)cc2)C#N
CACTVS 3.385C[C@](COc1cc(ccc1C(F)(F)F)C#N)(NC(=O)c2ccc(SC(F)(F)F)cc2)C#N
OpenEye OEToolkits 2.0.7CC(COc1cc(ccc1C(F)(F)F)C#N)(C#N)NC(=O)c2ccc(cc2)SC(F)(F)F
OpenEye OEToolkits 2.0.7C[C@@](COc1cc(ccc1C(F)(F)F)C#N)(C#N)NC(=O)c2ccc(cc2)SC(F)(F)F
FormulaC20 H13 F6 N3 O2 S
Name~{N}-[(2~{S})-2-cyano-1-[5-cyano-2-(trifluoromethyl)phenoxy]propan-2-yl]-4-(trifluoromethylsulfanyl)benzamide;
monepantel
ChEMBL
DrugBank
ZINC
PDB chain8zfk Chain E Residue 602 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
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PDB8zfk Structural basis of acetylcholine receptor like-23 (ACR-23) activation by anthelmintics monepantel and betaine
Resolution2.64 Å
Binding residue
(original residue number in PDB)
Y244 L247 N248
Binding residue
(residue number reindexed from 1)
Y223 L226 N227
Annotation score1
Gene Ontology
Molecular Function
GO:0046872 metal ion binding
Cellular Component
GO:0042597 periplasmic space

View graph for
Molecular Function

View graph for
Cellular Component
External links
PDB RCSB:8zfk, PDBe:8zfk, PDBj:8zfk
PDBsum8zfk
PubMed
UniProtG5EG88;
P0ABE7|C562_ECOLX Soluble cytochrome b562 (Gene Name=cybC)

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