Structure of PDB 8wwd Chain C Binding Site BS02
Receptor Information
>8wwd Chain C (length=329) Species:
398580
(Dinoroseobacter shibae DFL 12 = DSM 16493) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
GGMKALVYTGVAQLAFRDVPEPVPAAGDHLIRIDSVGICGSDMHAYLGHD
DRRPAPLILGHEGAGVIIGGPRDGERVTINPLVTCGTCPACVSGRDNLCA
TRQIISMPPRDGAFAQYVAMPARNLVTVPDDVPLEKAALAEPVAVSWHAV
RLGLASMADARRDSALVIGGGAIGVAAAISLQAQGVADVTLVEPNAMRRE
YLARDANYTIATPEQVAGRVFDITVDGVGYDATRAAASAATRPGGLLLHI
GLGGGSAGLDIRRITLQEITVIGTYTYTAQDFRDTCAAMFDGRLGGLDWT
ESRPLSAGADAFADIRAGRVPAPKIILKP
Ligand information
Ligand ID
ZN
InChI
InChI=1S/Zn/q+2
InChIKey
PTFCDOFLOPIGGS-UHFFFAOYSA-N
SMILES
Software
SMILES
CACTVS 3.341
[Zn++]
ACDLabs 10.04
OpenEye OEToolkits 1.5.0
[Zn+2]
Formula
Zn
Name
ZINC ION
ChEMBL
CHEMBL1236970
DrugBank
DB14532
ZINC
PDB chain
8wwd Chain C Residue 402 [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
8wwd
Enantioselective transformation of phytoplankton-derived dihydroxypropanesulfonate by marine bacteria.
Resolution
2.3 Å
Binding residue
(original residue number in PDB)
C37 H59 E60 E139
Binding residue
(residue number reindexed from 1)
C39 H61 E62 E141
Annotation score
4
External links
PDB
RCSB:8wwd
,
PDBe:8wwd
,
PDBj:8wwd
PDBsum
8wwd
PubMed
38709871
UniProt
A8LPS1
[
Back to BioLiP
]