Structure of PDB 8wg5 Chain C Binding Site BS02
Receptor Information
>8wg5 Chain C (length=111) Species:
9606
(Homo sapiens) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
ARAKAKTRSSRAGLQFPVGRVHRLLRKGNYSERVGAGAPVYLAAVLEYLT
AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGRVTIAQGGVLP
NIQAVLLPKCT
Ligand information
>8wg5 Chain J (length=147) [
Search DNA sequence
] [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
ctggagaatcccggtgccgaggccgctcaattggtcgtagacagctctag
caccgcttaaacgcacgtacgcgctgtcccccgcgttttaaccgccaagg
ggattactccctagtctccaggcacgtgtcagatatatacatcctgt
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
8wg5
Cryo-EM structure of USP16 bound to H2AK119Ub nucleosome
Resolution
3.05 Å
Binding residue
(original residue number in PDB)
R29 R42 V43 G44 A45 T76 R77
Binding residue
(residue number reindexed from 1)
R20 R33 V34 G35 A36 T67 R68
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Molecular Function
GO:0003677
DNA binding
GO:0030527
structural constituent of chromatin
GO:0046982
protein heterodimerization activity
Cellular Component
GO:0000786
nucleosome
View graph for
Molecular Function
View graph for
Cellular Component
External links
PDB
RCSB:8wg5
,
PDBe:8wg5
,
PDBj:8wg5
PDBsum
8wg5
PubMed
38918638
UniProt
P04908
|H2A1B_HUMAN Histone H2A type 1-B/E (Gene Name=H2AC4)
[
Back to BioLiP
]