Structure of PDB 8v6g Chain C Binding Site BS02

Receptor Information
>8v6g Chain C (length=435) Species: 8355 (Xenopus laevis) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
TGDRKGDLYPSSLQFYQHPPTENISLIEFETFAIERLKLLKAVENLGVSY
VKNSEEYSKKLELELRKLKFPYRPLHEEISDDVYDLRRKDHISHFILRLA
YCQSEDLRRWFIQQEMDLFKFRFGLLTKESVQEFLKLNDLQYVAISEDEK
NMHKEDLMNSSFGLSLTKMEDTEFYKVPFQAALDLVRPRKVFLWRGFAFI
PHKDIVSIVLNDFRAKLSKALALSARSLPVVQSDERLQPLLNHLSHSYII
SLEQIDGFAAKSFPLCMRQLHKSLRENHHLRHGGRMQYGLFLKGIGLTLE
QALQFWRLEFTKGKVDSEKFDKVYAYSIRHNYGKEGKRTDYTPYSCMKVI
LSNPPSQGDYHGCPFRHSDPELLKQKLQSFKVPSSGINQILELVKGMHYQ
LACQKYFELTHSVDDCGFSLNHPNQYFAESQKLLT
Ligand information
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB8v6g A mechanistic model of primer synthesis from catalytic structures of DNA polymerase alpha-primase
Resolution11.16 Å
Binding residue
(original residue number in PDB)
H306 R308 H309 R312
Binding residue
(residue number reindexed from 1)
H279 R281 H282 R285
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0003677 DNA binding
GO:0046872 metal ion binding
GO:0051539 4 iron, 4 sulfur cluster binding
Biological Process
GO:0006260 DNA replication
GO:0006261 DNA-templated DNA replication
GO:0006269 DNA replication, synthesis of primer
GO:0006270 DNA replication initiation
Cellular Component
GO:0005658 alpha DNA polymerase:primase complex
GO:1990077 primosome complex

View graph for
Molecular Function

View graph for
Biological Process

View graph for
Cellular Component
External links
PDB RCSB:8v6g, PDBe:8v6g, PDBj:8v6g
PDBsum8v6g
PubMed38491139
UniProtA0A1L8G3G3

[Back to BioLiP]