Structure of PDB 8q4d Chain C Binding Site BS02

Receptor Information
>8q4d Chain C (length=373) Species: 1422 (Geobacillus stearothermophilus) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
MITRGEFFMIKEMYERGMSISDIARELGIDRKTVRKYIHSPNPPSKSKRK
QRKSKLDPFKPYLQKRMLEDGVFNSEKLFFEIRQQGYTGGKTILKDYMKP
FRETAKKKYTVRYETLPGEQMQVDWKEVGEVVIEGKKVKLSLFVATLGYS
RMKYAVFTTSQDQEHLMECLIQSFKYFGGVPKKVLFDNMKTVTDGREQGV
VKWNQRFSEFASYYGFIPKVCRPYRAQTKGKVERAIQYIMDHFYVGTAFE
SIEELNFLLHRWLDQVANRKPNATTGISPQERWAEESLKPLPLKDYDTSY
LSYRKVHWDGSFSYKGEQWLLSAEYAGKEILVKERLNGDIRLYFRGEEIS
HVDQQKKVISFAEKIKKKQTEMA
Ligand information
>8q4d Chain e (length=58) [Search DNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
tcatgtcaaggccgattattttttccccaaaatcgccggtttaaaattcc
ccagaagg
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB8q4d Molecular basis for transposase activation by a dedicated AAA+ ATPase.
Resolution3.62 Å
Binding residue
(original residue number in PDB)		D30 K50 R52 S75 E76 T92 K95 D96 K99 R102 R225
Binding residue
(residue number reindexed from 1)		D30 K50 R52 S75 E76 T92 K95 D96 K99 R102 R225
Gene Ontology
Biological Process
GO:0006310 DNA recombination
GO:0032196 transposition

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Molecular Function
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Biological Process
External links
PDB RCSB:8q4d, PDBe:8q4d, PDBj:8q4d
PDBsum8q4d
PubMed38926614
UniProtQ45618|TRA6_GEOSE Putative transposase for insertion sequence element IS5376

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