Structure of PDB 8k9f Chain C Binding Site BS02

Receptor Information
>8k9f Chain C (length=449) Species: 324602 (Chloroflexus aurantiacus J-10-fl) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
EAYLLPGETYTSISAKIGDVPLTPPLKTPKGWLAGFSVAFFMLMIFFVSV
TWLFIRGVGIWGINIPVGWGMDIINFVWWIGIGHAGTLISAILLLLNQGW
RNSINRFAEAMTLFAVACAGLYPILHLGRPWLFYWLIPYPNTHGMWPQFR
SALAWDVFAISTYATVSLVFWLVGLIPDFATLRDRAKNIWVKRLYGIAAL
GWRGSARHWHRYEMASILLAGLSTPLVVSVHSIISLDFAISQVPGWQVTV
FPPYFVAGAVFAGFAMVLLLMIPVRTFYGFENYITLHHLDVMAKVMLTTG
MIVVYGYFMEVFASLYSGNEFEEYLLYNRLFGPSSWAYWGLLFCNAVAIQ
PLWFKKVRQNIPALLIISLIVSVGMWLERYVIIVISLERDFLPSSWDIYI
PTIWDWSLYIGTFGLFFTLLFLFIRVLPMINIFEMRLFLYQETEKAKQR
Ligand information
Ligand IDJLQ
InChIInChI=1S/C35H70NO8P/c1-3-5-7-9-11-13-15-16-18-19-21-23-25-27-34(37)41-31-33(32-43-45(39,40)42-30-29-36)44-35(38)28-26-24-22-20-17-14-12-10-8-6-4-2/h33H,3-32,36H2,1-2H3,(H,39,40)/t33-/m1/s1
InChIKeyMMLCPRRXWWDUCM-MGBGTMOVSA-N
SMILES
SoftwareSMILES
CACTVS 3.385CCCCCCCCCCCCCCCC(=O)OC[CH](CO[P](O)(=O)OCCN)OC(=O)CCCCCCCCCCCCC
OpenEye OEToolkits 2.0.7CCCCCCCCCCCCCCCC(=O)OCC(COP(=O)(O)OCCN)OC(=O)CCCCCCCCCCCCC
CACTVS 3.385CCCCCCCCCCCCCCCC(=O)OC[C@H](CO[P](O)(=O)OCCN)OC(=O)CCCCCCCCCCCCC
OpenEye OEToolkits 2.0.7CCCCCCCCCCCCCCCC(=O)OC[C@H](COP(=O)(O)OCCN)OC(=O)CCCCCCCCCCCCC
FormulaC35 H70 N O8 P
Name[(2~{R})-3-[2-azanylethoxy(oxidanyl)phosphoryl]oxy-2-tetradecanoyloxy-propyl] hexadecanoate;
1-hexadecanoyl-2-tetradecanoyl-sn-glycero-3-phosphoethanolamine;
PE(16:0/14:0)
ChEMBL
DrugBank
ZINC
PDB chain8k9f Chain C Residue 501 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB8k9f Cryo-EM structure of HQNO-bound Alternative Complex III from the anoxygenic phototrophic bacterium Chloroflexus aurantiacus.
Resolution2.9 Å
Binding residue
(original residue number in PDB)
Y18 Q113 V306 K309 T313 T314 I317
Binding residue
(residue number reindexed from 1)
Y3 Q98 V291 K294 T298 T299 I302
Annotation score1
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Cellular Component
GO:0005886 plasma membrane
GO:0016020 membrane

View graph for
Cellular Component
External links
PDB RCSB:8k9f, PDBe:8k9f, PDBj:8k9f
PDBsum8k9f
PubMed38299372
UniProtA9WEV4

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