Structure of PDB 8k9e Chain C Binding Site BS02

Receptor Information
>8k9e Chain C (length=449) Species: 324602 (Chloroflexus aurantiacus J-10-fl) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
EAYLLPGETYTSISAKIGDVPLTPPLKTPKGWLAGFSVAFFMLMIFFVSV
TWLFIRGVGIWGINIPVGWGMDIINFVWWIGIGHAGTLISAILLLLNQGW
RNSINRFAEAMTLFAVACAGLYPILHLGRPWLFYWLIPYPNTHGMWPQFR
SALAWDVFAISTYATVSLVFWLVGLIPDFATLRDRAKNIWVKRLYGIAAL
GWRGSARHWHRYEMASILLAGLSTPLVVSVHSIISLDFAISQVPGWQVTV
FPPYFVAGAVFAGFAMVLLLMIPVRTFYGFENYITLHHLDVMAKVMLTTG
MIVVYGYFMEVFASLYSGNEFEEYLLYNRLFGPSSWAYWGLLFCNAVAIQ
PLWFKKVRQNIPALLIISLIVSVGMWLERYVIIVISLERDFLPSSWDIYI
PTIWDWSLYIGTFGLFFTLLFLFIRVLPMINIFEMRLFLYQETEKAKQR
Ligand information
Ligand IDJM9
InChIInChI=1S/C48H92O6/c1-6-7-8-9-10-11-12-13-18-25-30-35-40-48(51)54-45(41-52-46(49)38-33-28-23-19-14-16-21-26-31-36-43(2)3)42-53-47(50)39-34-29-24-20-15-17-22-27-32-37-44(4)5/h43-45H,6-42H2,1-5H3
InChIKeyFXZBBNDITVPQLC-UHFFFAOYSA-N
SMILES
SoftwareSMILES
CACTVS 3.385
OpenEye OEToolkits 2.0.7		CCCCCCCCCCCCCCC(=O)OC(COC(=O)CCCCCCCCCCCC(C)C)COC(=O)CCCCCCCCCCCC(C)C
FormulaC48 H92 O6
Name1,3-bis(13-methyltetradecanoyloxy)propan-2-yl pentadecanoate
ChEMBL
DrugBank
ZINC
PDB chain8k9e Chain F Residue 502 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB8k9e Cryo-EM structure of HQNO-bound Alternative Complex III from the anoxygenic phototrophic bacterium Chloroflexus aurantiacus.
Resolution3.33 Å
Binding residue
(original residue number in PDB)		L233 G236 P240
Binding residue
(residue number reindexed from 1)		L218 G221 P225
Annotation score1
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Cellular Component
GO:0005886 plasma membrane
GO:0016020 membrane

View graph for
Cellular Component
External links
PDB RCSB:8k9e, PDBe:8k9e, PDBj:8k9e
PDBsum8k9e
PubMed38299372
UniProtA9WEV4

[Back to BioLiP]